RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 CEP78Q5JTW2 689 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 KIAA1161Q6NSJ0 714 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 DDX46Q7L014 1031 aaKnown RBP3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 AFAP1L2Q8N4X5 818 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 CASKIN2Q8WXE0 1202 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 FATE1Q969F0 183 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 VPS16Q9H269 839 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 METTL14Q9HCE5 456 aaKnown RBP3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 KLC4Q9NSK0 619 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 RBM12Q9NTZ6 932 aaKnown RBP3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 TUBA8Q9NY65 449 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 ZBTB21Q9ULJ3 1066 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 NEU2Q9Y3R4 380 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 KCNU1A8MYU2 1149 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 EBLN1P0CF75 366 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 NR2F6P10588 404 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 PPP3CBP16298 524 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 ITIH3Q06033 890 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 ZNF844Q08AG5 666 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 DYRK1AQ13627 763 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 PDCD1Q15116 288 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 DHCR24Q15392 516 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 FSCN1Q16658 493 aaKnown RBP3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 MUM1L1Q5H9M0 696 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 DDX42Q86XP3 938 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 UBR7Q8N806 425 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 PRPF38AQ8NAV1 312 aaKnown RBP3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 SNX19Q92543 992 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 GREM2Q9H772 168 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 EMC7Q9NPA0 242 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 DDX56Q9NY93 547 aaKnown RBP3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 SH3BP4Q9P0V3 963 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 SERGEFQ9UGK8 458 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 MCM8Q9UJA3 840 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 ZNF112Q9UJU3 913 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 CDYLQ9Y232 598 aa3.28□□□□□ -1.88
HMGB3P2-201ENST00000411913 ALG1L2C9J202 215 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 TOR1BO14657 336 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 GPR32O75388 356 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 ENDOD1O94919 500 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 EYA4O95677 639 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 TUBB4AP04350 444 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 DRD4P21917 467 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 PCSK1P29120 753 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 CDKN1CP49918 316 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 ZNF134P52741 427 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 ADRM1Q16186 407 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 ATP2B3Q16720 1220 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 CNGA4Q8IV77 575 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 ADGRG5Q8IZF4 528 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 NLGN4YQ8NFZ3 816 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 CCHCR1Q8TD31 782 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 LEO1Q8WVC0 666 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 STAG1Q8WVM7 1258 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 AUTS2Q8WXX7 1259 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 CYFIP2Q96F07 1278 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 ACAP3Q96P50 834 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 ADI1Q9BV57 179 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 FAM126AQ9BYI3 521 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 HOMER2Q9NSB8 354 aa3.27□□□□□ -1.89
HMGB3P2-201ENST00000411913 WDR27A2RRH5 827 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 VWC2LB2RUY7 222 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 SMIM22K7EJ46 135 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 ZEB2O60315 1214 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 BRINP1O60477 761 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 JTBO76095 146 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 PDGFRBP09619 1106 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 GSPT1P15170 499 aaKnown RBP3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 ENPP1P22413 925 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 HNRNPMP52272 730 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 LRRC41Q15345 812 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 SEPT7Q16181 437 aaKnown RBP3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 PROSER3Q2NL68 480 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 PLEKHG6Q3KR16 790 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 ATP13A4Q4VNC1 1196 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 PLAC9Q5JTB6 97 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 PRAMEF17Q5VTA0 474 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 CEP85Q6P2H3 762 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 STRA8Q7Z7C7 330 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 KRT73Q86Y46 540 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 ATL2Q8NHH9 583 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 NSMCE1Q8WV22 266 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 PBKQ96KB5 322 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 TMEM79Q9BSE2 394 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 TLR10Q9BXR5 811 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 ACE2Q9BYF1 805 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 IFT122Q9HBG6 1241 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 DMRT3Q9NQL9 472 aa3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 TOPORSQ9NS56 1045 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P2-201ENST00000411913 PHLDB1Q86UU1 1377 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 ADGRA2Q96PE1 1338 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 CLSPNQ9HAW4 1339 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 TISP43B9A030 160 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 HAUS5O94927 633 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 AGFG2O95081 481 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 BPIP17213 487 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 NDUFB7P17568 137 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 ARHGAP25P42331 645 aa3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 ANXA11P50995 505 aaKnown RBP3.25□□□□□ -1.89
HMGB3P2-201ENST00000411913 MRPS9P82933 396 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms