RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 NAA35Q5VZE5 725 aa14.44□□□□□ -0.1
LIMS1-205ENST00000410093 ZBTB33Q86T24 672 aa14.44□□□□□ -0.1
LIMS1-205ENST00000410093 TSEN2Q8NCE0 465 aaKnown RBP14.44□□□□□ -0.1
LIMS1-205ENST00000410093 ZNF606Q8WXB4 792 aa14.44□□□□□ -0.1
LIMS1-205ENST00000410093 KRT35Q92764 455 aa14.44□□□□□ -0.1
LIMS1-205ENST00000410093 CYFIP2Q96F07 1278 aa14.44□□□□□ -0.1
LIMS1-205ENST00000410093 NLRP4Q96MN2 994 aa14.44□□□□□ -0.1
LIMS1-205ENST00000410093 GDAP1L1Q96MZ0 367 aa14.44□□□□□ -0.1
LIMS1-205ENST00000410093 ZIM3Q96PE6 472 aa14.44□□□□□ -0.1
LIMS1-205ENST00000410093 LHX5Q9H2C1 402 aa14.44□□□□□ -0.1
LIMS1-205ENST00000410093 CYP3A43Q9HB55 503 aa14.44□□□□□ -0.1
LIMS1-205ENST00000410093 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.44□□□□□ -0.1
LIMS1-205ENST00000410093 CWC15Q9P013 229 aaKnown RBP14.44□□□□□ -0.1
LIMS1-205ENST00000410093 MTRF1LQ9UGC7 380 aaKnown RBP14.44□□□□□ -0.1
LIMS1-205ENST00000410093 MROH7Q68CQ1 1323 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 ESYT3A0FGR9 886 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 NDC80O14777 642 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 STAU1O95793 577 aaKnown RBP14.43□□□□□ -0.1
LIMS1-205ENST00000410093 PYGMP11217 842 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 MMP8P22894 467 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 RRM1P23921 792 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 ACTN2P35609 894 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 GRB14Q14449 540 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 DUSP28Q4G0W2 176 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 SPOPLQ6IQ16 392 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 TRIM50Q86XT4 487 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 JAMLQ86YT9 394 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 KATNAL2Q8IYT4 538 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 ARFGAP2Q8N6H7 521 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 PRELID2Q8N945 189 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 FEZF2Q8TBJ5 459 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 FMO2Q99518 471 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 TMEM106CQ9BVX2 250 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 MTMR12Q9C0I1 747 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 RNF39Q9H2S5 420 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 ACP6Q9NPH0 428 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.43□□□□□ -0.1
LIMS1-205ENST00000410093 CISHQ9NSE2 258 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 CALCOCO1Q9P1Z2 691 aa14.43□□□□□ -0.1
LIMS1-205ENST00000410093 ZSCAN5CA6NGD5 496 aaPredicted RBP14.42□□□□□ -0.1
LIMS1-205ENST00000410093 SLC15A5A6NIM6 579 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 DAPK3O43293 454 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 SHOX2O60902 331 aaPredicted RBP14.42□□□□□ -0.1
LIMS1-205ENST00000410093 PPFIA2O75334 1257 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 FAM153BP0C7A2 387 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 HARSP12081 509 aaKnown RBP14.42□□□□□ -0.1
LIMS1-205ENST00000410093 CAPN2P17655 700 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 COILP38432 576 aaPredicted RBP14.42□□□□□ -0.1
LIMS1-205ENST00000410093 TNFSF9P41273 254 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 PTGIRP43119 386 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 LMAN1P49257 510 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 GUCY2FP51841 1108 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 COPS2P61201 443 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 MRPS25P82663 173 aaKnown RBP14.42□□□□□ -0.1
LIMS1-205ENST00000410093 SKOR1P84550 965 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 CAV1Q03135 178 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 LMNB2Q03252 620 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 MAMLD1Q13495 774 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 SLMAPQ14BN4 828 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 PTPROQ16827 1216 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 FAM153CQ494X1 144 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 CCDC137Q6PK04 289 aaKnown RBP14.42□□□□□ -0.1
LIMS1-205ENST00000410093 CEP128Q6ZU80 1094 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 DPP9Q86TI2 863 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 EXD1Q8NHP7 514 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 RAET1EQ8TD07 263 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 CPA5Q8WXQ8 436 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 TSPAN18Q96SJ8 248 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 ADPGKQ9BRR6 497 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 ARHGAP39Q9C0H5 1083 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 KATNBL1Q9H079 304 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 MIS12Q9H081 205 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 CDT1Q9H211 546 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 RNPEPQ9H4A4 650 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 IFT122Q9HBG6 1241 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 PDGFCQ9NRA1 345 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 WDR35Q9P2L0 1181 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 FAM153AQ9UHL3 310 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 KIAA1257Q9ULG3 409 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 C2CD2Q9Y426 696 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 PTCH2Q9Y6C5 1203 aa14.42□□□□□ -0.1
LIMS1-205ENST00000410093 H3BRB1 525 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 ATMINO43313 823 aaPredicted RBP14.41□□□□□ -0.1
LIMS1-205ENST00000410093 CST3P01034 146 aaPredicted RBP14.41□□□□□ -0.1
LIMS1-205ENST00000410093 MYZAPP0CAP1 466 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 GSCP56915 257 aaPredicted RBP14.41□□□□□ -0.1
LIMS1-205ENST00000410093 MYL6P60660 151 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 TFAMQ00059 246 aaKnown RBP14.41□□□□□ -0.1
LIMS1-205ENST00000410093 ZNF211Q13398 564 aaPredicted RBP14.41□□□□□ -0.1
LIMS1-205ENST00000410093 PIGHQ14442 188 aaPredicted RBP14.41□□□□□ -0.1
LIMS1-205ENST00000410093 DGKDQ16760 1214 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 DCAF4L1Q3SXM0 396 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 ZNF667Q5HYK9 610 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 TMC3Q7Z5M5 1100 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 PLEKHH3Q7Z736 793 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 BBOF1Q8ND07 529 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 COPS5Q92905 334 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 RBM41Q96IZ5 413 aaKnown RBP14.41□□□□□ -0.1
LIMS1-205ENST00000410093 BCO2Q9BYV7 579 aa14.41□□□□□ -0.1
LIMS1-205ENST00000410093 XYLT2Q9H1B5 865 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms