RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 NIF3L1Q9GZT8 377 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 PLXNA4Q9HCM2 1894 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 APEX2Q9UBZ4 518 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 DSEQ9UL01 958 aa16.32■□□□□ 0.2
LSM5-207ENST00000410044 TMEM265A0A087WTH1 108 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 H3BNC9 293 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 GABRDO14764 452 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 HUS1O60921 280 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 NOL4O94818 638 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 SOD2P04179 222 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 RFX1P22670 979 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 TBXAS1P24557 533 aaPredicted RBP16.31■□□□□ 0.2
LSM5-207ENST00000410044 ASPAP45381 313 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 TNNC1P63316 161 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 GSE1Q14687 1217 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 USP41Q3LFD5 358 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 FIGNQ5HY92 759 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 PPP2R2DQ66LE6 453 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 ENOSF1Q7L5Y1 443 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 APPL2Q8NEU8 664 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 MRFAP1L1Q96HT8 127 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 C11orf84Q9BUA3 381 aaPredicted RBP16.31■□□□□ 0.2
LSM5-207ENST00000410044 HERC2P3Q9BVR0 1158 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 NAA15Q9BXJ9 866 aaKnown RBP16.31■□□□□ 0.2
LSM5-207ENST00000410044 GANQ9H2C0 597 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 GRPEL1Q9HAV7 217 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 NXF1Q9UBU9 619 aaKnown RBP16.31■□□□□ 0.2
LSM5-207ENST00000410044 PUF60Q9UHX1 559 aaKnown RBP16.31■□□□□ 0.2
LSM5-207ENST00000410044 POLIQ9UNA4 740 aa16.31■□□□□ 0.2
LSM5-207ENST00000410044 ITIH6Q6UXX5 1313 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 OAZ2O95190 189 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 ODC1P11926 461 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 UCHL3P15374 230 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 WARSP23381 471 aaKnown RBP16.3■□□□□ 0.2
LSM5-207ENST00000410044 ZNF75DP51815 510 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 PLCB2Q00722 1185 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 LRMPQ12912 555 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 CUL2Q13617 745 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 FAM171A1Q5VUB5 890 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 KIAA0319Q5VV43 1072 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 TAS1R1Q7RTX1 841 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 SPRED2Q7Z698 418 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 ARHGEF19Q8IW93 802 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 TTC39CQ8N584 583 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 UBR7Q8N806 425 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 ELMO3Q96BJ8 720 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 IQCDQ96DY2 449 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 NUP58Q9BVL2 599 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 LSM14BQ9BX40 385 aaKnown RBP16.3■□□□□ 0.2
LSM5-207ENST00000410044 OXCT2Q9BYC2 517 aaPredicted RBP16.3■□□□□ 0.2
LSM5-207ENST00000410044 EDEM3Q9BZQ6 932 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 UBE2TQ9NPD8 197 aaPredicted RBP16.3■□□□□ 0.2
LSM5-207ENST00000410044 L1RE1Q9UN81 338 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 CNTN6Q9UQ52 1028 aa16.3■□□□□ 0.2
LSM5-207ENST00000410044 I3L4J1 428 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 TBC1D4O60343 1298 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 LILRB3O75022 631 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 TKTP29401 623 aaKnown RBP16.29■□□□□ 0.2
LSM5-207ENST00000410044 LHX1P48742 406 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 KLK7P49862 253 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 MRE11P49959 708 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 MFAP3P55082 362 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 DSG1Q02413 1049 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 INCA1Q0VD86 236 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 WSCD1Q658N2 575 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 PDXDC1Q6P996 788 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 VSTM4Q8IW00 320 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 PPM1KQ8N3J5 372 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 PDCL2Q8N4E4 241 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 FBXO22Q8NEZ5 403 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 NEK11Q8NG66 645 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 KBTBD7Q8WVZ9 684 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 KREMEN1Q96MU8 473 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 MMS19Q96T76 1030 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 TTPALQ9BTX7 342 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 LMAN2LQ9H0V9 348 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 ZBP1Q9H171 429 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 SDCBP2Q9H190 292 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 DNAJC12Q9UKB3 198 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 SSX2IPQ9Y2D8 614 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 IRAK3Q9Y616 596 aa16.29■□□□□ 0.2
LSM5-207ENST00000410044 CTSAP10619 480 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 ACO1P21399 889 aaKnown RBP16.28■□□□□ 0.2
LSM5-207ENST00000410044 CDH8P55286 799 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 YWHAEP62258 255 aaKnown RBP16.28■□□□□ 0.2
LSM5-207ENST00000410044 APBA1Q02410 837 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 GPM6BQ13491 265 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 CAMK1Q14012 370 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 PDE12Q6L8Q7 609 aaKnown RBP16.28■□□□□ 0.2
LSM5-207ENST00000410044 ANKS3Q6ZW76 656 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 RRAGAQ7L523 313 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 UNC93AQ86WB7 457 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 METTL23Q86XA0 190 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 VPS52Q8N1B4 723 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 LNX1Q8TBB1 728 aaPredicted RBP16.28■□□□□ 0.2
LSM5-207ENST00000410044 POF1BQ8WVV4 589 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 PIK3R5Q8WYR1 880 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 MRPL45Q9BRJ2 306 aaKnown RBP16.28■□□□□ 0.2
LSM5-207ENST00000410044 STK33Q9BYT3 514 aa16.28■□□□□ 0.2
LSM5-207ENST00000410044 TTYH3Q9C0H2 523 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms