RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 FKBP3Q00688 224 aaKnown RBP11.74□□□□□ -0.53
CHMP3-205ENST00000409810 ROR1Q01973 937 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 BIRC3Q13489 604 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 MORC3Q14149 939 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 SMAD2Q15796 467 aaKnown RBP11.74□□□□□ -0.53
CHMP3-205ENST00000409810 ATAT1Q5SQI0 421 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 RARS2Q5T160 578 aaKnown RBP11.74□□□□□ -0.53
CHMP3-205ENST00000409810 TPGS2Q68CL5 300 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 ISM2Q6H9L7 571 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 SYCE2Q6PIF2 218 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 CYP26C1Q6V0L0 522 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 C15orf39Q6ZRI6 1047 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 CCDC149Q6ZUS6 474 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 FAM186BQ8IYM0 893 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 THEM5Q8N1Q8 247 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 KREMEN2Q8NCW0 462 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 SPATA18Q8TC71 538 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 ADAMTS19Q8TE59 1207 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 PARD3BQ8TEW8 1205 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 FBXL5Q9UKA1 691 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 MAFFQ9ULX9 164 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 USP15Q9Y4E8 981 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-205ENST00000409810 TIMM13Q9Y5L4 95 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-205ENST00000409810 PTPRJQ12913 1337 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 DENND4AQ7Z401 1863 aa11.74□□□□□ -0.53
CHMP3-205ENST00000409810 C5orf42Q9H799 3197 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 BIN1O00499 593 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 IKBKBO14920 756 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 SPTLC1O15269 473 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 SLC16A3O15427 465 aaKnown RBP11.73□□□□□ -0.53
CHMP3-205ENST00000409810 TBC1D4O60343 1298 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 AKAP3O75969 853 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 HNRNPA1P09651 372 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHMP3-205ENST00000409810 ATICP31939 592 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 ELF1P32519 619 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 VAMP7P51809 220 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 ARPP19P56211 112 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 CLDN10P78369 228 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 PAK1Q13153 545 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 CBX2Q14781 532 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-205ENST00000409810 UVSSAQ2YD98 709 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 PPM1LQ5SGD2 360 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 KLHL10Q6JEL2 608 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 LILRA6Q6PI73 481 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 FOXR2Q6PJQ5 311 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 TMEM86AQ8N2M4 240 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 TOP6BLQ8N6T0 577 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 ZNF461Q8TAF7 563 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 CXorf38Q8TB03 319 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 SUSD6Q92537 303 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 SYAP1Q96A49 352 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-205ENST00000409810 HPDLQ96IR7 371 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 UHRF1Q96T88 793 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-205ENST00000409810 APOL5Q9BWW9 433 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 RHOBTB2Q9BYZ6 727 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 S1PR5Q9H228 398 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 GDAP2Q9NXN4 497 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 SIX4Q9UIU6 781 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 SNX9Q9Y5X1 595 aa11.73□□□□□ -0.53
CHMP3-205ENST00000409810 WDR27A2RRH5 827 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 TRIM49BA6NDI0 452 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 ADAM12O43184 909 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 STX10O60499 249 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 XYLBO75191 536 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 ZMYND10O75800 440 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 FGFR1OPO95684 399 aaKnown RBP11.72□□□□□ -0.53
CHMP3-205ENST00000409810 STAU1O95793 577 aaKnown RBP11.72□□□□□ -0.53
CHMP3-205ENST00000409810 MBD3O95983 291 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 C8AP07357 584 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 SPATA31D3P0C874 917 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 HOXA9P31269 272 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 TNNC1P63316 161 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 MYL7Q01449 175 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 SMARCB1Q12824 385 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 WSCD1Q658N2 575 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 ANKRD40Q6AI12 368 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 RSPO2Q6UXX9 243 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-205ENST00000409810 TMC5Q6UXY8 1006 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 SPATA31D4Q6ZUB0 917 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 DPH6Q7L8W6 267 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 GPR149Q86SP6 731 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 ZC3H3Q8IXZ2 948 aaKnown RBP11.72□□□□□ -0.53
CHMP3-205ENST00000409810 NELFBQ8WX92 580 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 BORCS6Q96GS4 357 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 PIDD1Q9HB75 910 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 AFF4Q9UHB7 1163 aaKnown RBP11.72□□□□□ -0.53
CHMP3-205ENST00000409810 DACH1Q9UI36 760 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 CTNND2Q9UQB3 1225 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 DOCK6Q96HP0 2047 aa11.72□□□□□ -0.53
CHMP3-205ENST00000409810 CCDC195A0A1B0GUA6 201 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 PRRG1O14668 218 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 RFPL2O75678 378 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 ABLIM3O94929 683 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 PAPLNO95428 1278 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 LRG1P02750 347 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 POU2F2P09086 479 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 P4HA1P13674 534 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 ATF2P15336 505 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 GTF2H1P32780 548 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 LHX1P48742 406 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms