RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 RUNDC3BQ96NL0 473 aa21.39■■□□□ 1.02
USP39-204ENST00000409766 ABHD16BQ9H3Z7 469 aa21.39■■□□□ 1.02
USP39-204ENST00000409766 KAT6AQ92794 2004 aa21.39■■□□□ 1.01
USP39-204ENST00000409766 ZEB2O60315 1214 aa21.39■■□□□ 1.01
USP39-204ENST00000409766 MMP3P08254 477 aa21.39■■□□□ 1.01
USP39-204ENST00000409766 CAPN2P17655 700 aa21.39■■□□□ 1.01
USP39-204ENST00000409766 FNTAP49354 379 aa21.39■■□□□ 1.01
USP39-204ENST00000409766 ACVR2BQ13705 512 aa21.39■■□□□ 1.01
USP39-204ENST00000409766 C2orf69Q8N8R5 385 aa21.39■■□□□ 1.01
USP39-204ENST00000409766 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.39■■□□□ 1.01
USP39-204ENST00000409766 TFAP2BQ92481 460 aa21.39■■□□□ 1.01
USP39-204ENST00000409766 FMO2Q99518 471 aa21.39■■□□□ 1.01
USP39-204ENST00000409766 LRRC19Q9H756 370 aa21.39■■□□□ 1.01
USP39-204ENST00000409766 PCDHGC3Q9UN70 934 aa21.39■■□□□ 1.01
USP39-204ENST00000409766 POLIQ9UNA4 740 aa21.39■■□□□ 1.01
USP39-204ENST00000409766 H0YGN5 161 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 TLR3O15455 904 aaKnown RBP21.38■■□□□ 1.01
USP39-204ENST00000409766 CDH5P33151 784 aaPredicted RBP21.38■■□□□ 1.01
USP39-204ENST00000409766 GRIK4Q16099 956 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 DAB2IPQ5VWQ8 1189 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 LRIG3Q6UXM1 1119 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 TMEM35BQ8NCS4 154 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 CXorf38Q8TB03 319 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 FEZF2Q8TBJ5 459 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 BCO2Q9BYV7 579 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 ZNF518BQ9C0D4 1074 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 RRAGCQ9HB90 399 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 NXF1Q9UBU9 619 aaKnown RBP21.38■■□□□ 1.01
USP39-204ENST00000409766 NFS1Q9Y697 457 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 TCRBV5S1A1TA0A578 114 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 PSTPIP1O43586 416 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 KRT19P08727 400 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 EIF4BP23588 611 aaKnown RBP21.38■■□□□ 1.01
USP39-204ENST00000409766 YWHAEP62258 255 aaKnown RBP21.38■■□□□ 1.01
USP39-204ENST00000409766 MTMR3Q13615 1198 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 JADE1Q6IE81 842 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 WDTC1Q8N5D0 677 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 C1orf131Q8NDD1 294 aaKnown RBP21.38■■□□□ 1.01
USP39-204ENST00000409766 NPLOC4Q8TAT6 608 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 FAXDC2Q96IV6 333 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 TXLNGYQ9BZA5 131 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 ASB7Q9H672 318 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 SNX24Q9Y343 169 aa21.38■■□□□ 1.01
USP39-204ENST00000409766 ADCY6O43306 1168 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 GJB6O95452 261 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 CALB1P05937 261 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 MAN1A1P33908 653 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 TAS2R40P59535 323 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 DHX9Q08211 1270 aaKnown RBP21.37■■□□□ 1.01
USP39-204ENST00000409766 LLGL1Q15334 1064 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 DGKDQ16760 1214 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 ZNF667Q5HYK9 610 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 IQSEC1Q6DN90 963 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 ZDHHC24Q6UX98 284 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 RHOT1Q8IXI2 618 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 CCDC105Q8IYK2 499 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 OR6J1Q8NGC5 347 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 NLRP7Q8WX94 980 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 GRHL1Q9NZI5 618 aa21.37■■□□□ 1.01
USP39-204ENST00000409766 TMEM191CA6NGB0 347 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 O00370 1275 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 PPFIA2O75334 1257 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 CELF2O95319 508 aaKnown RBP21.36■■□□□ 1.01
USP39-204ENST00000409766 RPL7AP62424 266 aaKnown RBP21.36■■□□□ 1.01
USP39-204ENST00000409766 SLC10A6Q3KNW5 377 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 WDR72Q3MJ13 1102 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 KIAA0319LQ8IZA0 1049 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 SLCO2A1Q92959 643 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 HERPUD2Q9BSE4 406 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 ZHX1Q9UKY1 873 aaPredicted RBP21.36■■□□□ 1.01
USP39-204ENST00000409766 ZNF236Q9UL36 1845 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 TSPAN1O60635 241 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 ITGB3P05106 788 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 RPL21P46778 160 aaKnown RBP21.36■■□□□ 1.01
USP39-204ENST00000409766 KCNJ1P48048 391 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 KYAT1Q16773 422 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 TMEM130Q8N3G9 435 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 IP6K2Q9UHH9 426 aa21.36■■□□□ 1.01
USP39-204ENST00000409766 SLC15A5A6NIM6 579 aa21.35■■□□□ 1.01
USP39-204ENST00000409766 GBP1P32455 592 aa21.35■■□□□ 1.01
USP39-204ENST00000409766 ACTN2P35609 894 aa21.35■■□□□ 1.01
USP39-204ENST00000409766 RAP1GAPP47736 663 aa21.35■■□□□ 1.01
USP39-204ENST00000409766 PLTPP55058 493 aa21.35■■□□□ 1.01
USP39-204ENST00000409766 SGO2Q562F6 1265 aa21.35■■□□□ 1.01
USP39-204ENST00000409766 KATNAL2Q8IYT4 538 aa21.35■■□□□ 1.01
USP39-204ENST00000409766 FBXO25Q8TCJ0 367 aa21.35■■□□□ 1.01
USP39-204ENST00000409766 UBLCP1Q8WVY7 318 aaPredicted RBP21.35■■□□□ 1.01
USP39-204ENST00000409766 MAIP1Q8WWC4 291 aa21.35■■□□□ 1.01
USP39-204ENST00000409766 PCNTO95613 3336 aa21.35■■□□□ 1.01
USP39-204ENST00000409766 A0A1B0GUA9 196 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 LACTBP83111 547 aaPredicted RBP21.34■■□□□ 1.01
USP39-204ENST00000409766 SPDYCQ5MJ68 293 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 CEP85LQ5SZL2 805 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 KCTD16Q68DU8 428 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 C1orf54Q8WWF1 131 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 SDCBP2Q9H190 292 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 VRTNQ9H8Y1 702 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 PTPN22Q9Y2R2 807 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 CITO14578 2027 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 SHOX2O60902 331 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms