RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 FGFR4P22455 802 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 HABP4Q5JVS0 413 aaKnown RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 OVOS1Q6IE37 1185 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 C4orf19Q8IY42 314 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 RABGGTAQ92696 567 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 GDAP1L1Q96MZ0 367 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 RPRD1AQ96P16 312 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 RUSC1Q9BVN2 902 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 COG4Q9H9E3 785 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 PKP3Q9Y446 797 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 CDY2AQ9Y6F7 541 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 CNTNAP2Q9UHC6 1331 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 UBR1Q8IWV7 1749 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 BTBD19C9JJ37 291 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 GNGT2O14610 69 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 SLC37A4O43826 429 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 SMIM24O75264 130 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 PALMO75781 387 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 GARTP22102 1010 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 RASSF2P50749 326 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 MAP3K7CLP57077 242 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 PHKG1Q16816 387 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 SEZ6Q53EL9 994 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 TREML2Q5T2D2 321 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 IRAK1BP1Q5VVH5 260 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 MIB1Q86YT6 1006 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 UNC45BQ8IWX7 931 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 ZFPM1Q8IX07 1006 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 RCOR2Q8IZ40 523 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 PPP1R13BQ96KQ4 1090 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 MCEEQ96PE7 176 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 WDR18Q9BV38 432 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 C11orf49Q9H6J7 331 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 WDCPQ9H6R7 721 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 PDE11AQ9HCR9 933 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 G3BP2Q9UN86 482 aaKnown RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 COL14A1Q05707 1796 aaKnown RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 HMGB1P1B2RPK0 211 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 PODXLO00592 558 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 RASGRF2O14827 1237 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 TRIM66O15016 1216 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 MAPK13O15264 365 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 MFAP3LO75121 409 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 NPM3O75607 178 aaKnown RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 RTN3O95197 1032 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 PCDH8O95206 1070 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 ANP32DO95626 131 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 GTF2H1P32780 548 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 PPM1AP35813 382 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 SGCGQ13326 291 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 MTA1Q13330 715 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 CUL1Q13616 776 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 FAM110CQ1W6H9 321 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 KIF19Q2TAC6 998 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 FNDC3BQ53EP0 1204 aaKnown RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 GPAT2Q6NUI2 795 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 MMS22LQ6ZRQ5 1243 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 NIPA1Q7RTP0 329 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 SYT2Q8N9I0 419 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 APBB2Q92870 758 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 CASQ2O14958 399 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 P4HA2O15460 535 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 GRAP2O75791 330 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 KRT37O76014 449 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 HSPA4LO95757 839 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 CHGBP05060 677 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 RHOCP08134 193 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 ACO1P21399 889 aaKnown RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 AKAP5P24588 427 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 BRD2P25440 801 aaKnown RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 TUFMP49411 452 aaKnown RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 PALB2Q86YC2 1186 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 SLC25A41Q8N5S1 370 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 GPATCH11Q8N954 259 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 GIPC2Q8TF65 315 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 CGRRF1Q99675 332 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 TRIM9Q9C026 710 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 SENP2Q9HC62 589 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 KLHL11Q9NVR0 708 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 DDX43Q9NXZ2 648 aaKnown RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 VPS28Q9UK41 221 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 GOLGA8MH3BSY2 632 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 ATP9BO43861 1147 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 U2AF2P26368 475 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 CXCR5P32302 372 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 MNAT1P51948 309 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 PSMC6P62333 389 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 APBA1Q02410 837 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 PIGHQ14442 188 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 BRD3Q15059 726 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 PCSK7Q16549 785 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 HS6ST3Q8IZP7 471 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 KLRG1Q96E93 195 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 APOL5Q9BWW9 433 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 STK33Q9BYT3 514 aa5.27□□□□□ -1.57
SCN3A-203ENST00000409101 A1CFQ9NQ94 594 aaKnown RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 METTL5Q9NRN9 209 aaKnown RBP5.27□□□□□ -1.57
SCN3A-203ENST00000409101 KPNA7A9QM74 516 aa5.26□□□□□ -1.57
SCN3A-203ENST00000409101 NDUFAB1O14561 156 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms