RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
APOBEC3B-204ENST00000407298 SMTNP53814 917 aa13.38□□□□□ -0.27
APOBEC3B-204ENST00000407298 SHC2P98077 582 aa13.38□□□□□ -0.27
APOBEC3B-204ENST00000407298 SRSF5Q13243 272 aaKnown RBP13.38□□□□□ -0.27
APOBEC3B-204ENST00000407298 GPR17Q13304 367 aa13.38□□□□□ -0.27
APOBEC3B-204ENST00000407298 MYBPC2Q14324 1141 aa13.38□□□□□ -0.27
APOBEC3B-204ENST00000407298 NOLC1Q14978 699 aaKnown RBP eCLIP13.38□□□□□ -0.27
APOBEC3B-204ENST00000407298 ARMCX5Q6P1M9 558 aa13.38□□□□□ -0.27
APOBEC3B-204ENST00000407298 CACNA2D4Q7Z3S7 1137 aa13.38□□□□□ -0.27
APOBEC3B-204ENST00000407298 TSPAN18Q96SJ8 248 aa13.38□□□□□ -0.27
APOBEC3B-204ENST00000407298 FOXP1Q9H334 677 aaPredicted RBP13.38□□□□□ -0.27
APOBEC3B-204ENST00000407298 ATXN3LQ9H3M9 355 aa13.38□□□□□ -0.27
APOBEC3B-204ENST00000407298 HSFX1Q9UBD0 423 aa13.38□□□□□ -0.27
APOBEC3B-204ENST00000407298 ZMYM5Q9UJ78 669 aa13.38□□□□□ -0.27
APOBEC3B-204ENST00000407298 CITO14578 2027 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 COL4A2P08572 1712 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 AXIN1O15169 862 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 CLDN3O15551 220 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 HIP1RO75146 1068 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 HARSP12081 509 aaKnown RBP13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 CYP3A5P20815 502 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 LRPAP1P30533 357 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 AMPD2Q01433 879 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 DUSP4Q13115 394 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 GNL2Q13823 731 aaKnown RBP13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 PON2Q15165 354 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 KYAT1Q16773 422 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 SLC10A6Q3KNW5 377 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 TTC38Q5R3I4 469 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 DSTYKQ6XUX3 929 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 TMC8Q8IU68 726 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 GAB3Q8WWW8 586 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 PSMG2Q969U7 264 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 EXOC4Q96A65 974 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 C8orf76Q96K31 380 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 NTPCRQ9BSD7 190 aaKnown RBP13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 LRRC3Q9BY71 257 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 ARRDC1-AS1Q9H2J1 176 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 NOL7Q9UMY1 257 aaKnown RBP13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 LIMCH1Q9UPQ0 1083 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 PCDHGA5Q9Y5G8 931 aa13.37□□□□□ -0.27
APOBEC3B-204ENST00000407298 H0YCG3 227 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 RPP40O75818 363 aaKnown RBP13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 AKAP3O75969 853 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 CLTAP09496 248 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 PMLP29590 882 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 MATR3P43243 847 aaKnown RBP eCLIP13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 SOX9P48436 509 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 TUFMP49411 452 aaKnown RBP13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 GRSF1Q12849 480 aaKnown RBP eCLIP13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 CCINQ13939 588 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 VEPH1Q14D04 833 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 ECM1Q16610 540 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 ITPRIPL2Q3MIP1 535 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 GPR158Q5T848 1215 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 N4BP2L1Q5TBK1 243 aaPredicted RBP13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 KRT79Q5XKE5 535 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 CENPPQ6IPU0 288 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 TXNDC11Q6PKC3 985 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 ZPBP2Q6X784 338 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 Q6ZS52 159 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 TAS1R3Q7RTX0 852 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 DNAJB7Q7Z6W7 309 aaPredicted RBP13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 CCDC83Q8IWF9 413 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 BPIFB1Q8TDL5 484 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 SNX29Q8TEQ0 813 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 RSPRY1Q96DX4 576 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 PGLYRP2Q96PD5 576 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 GCNAQ96QF7 691 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 TMEM209Q96SK2 561 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 GTSE1Q9NYZ3 720 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 ANKFY1Q9P2R3 1169 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 UBQLN1Q9UMX0 589 aaKnown RBP13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 SLC8A2Q9UPR5 921 aa13.36□□□□□ -0.27
APOBEC3B-204ENST00000407298 SDK1Q7Z5N4 2213 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 ABLIM1O14639 778 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 TM4SF5O14894 197 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 SLC16A4O15374 487 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 EPN2O95208 641 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 CD2BP2O95400 341 aaKnown RBP13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 CCDC192P0DO97 292 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 TYMPP19971 482 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 GABRR2P28476 465 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 CDC25CP30307 473 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 RAP1GAPP47736 663 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 AARSP49588 968 aaKnown RBP eCLIP13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 MCL1Q07820 350 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 TAF12Q16514 161 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 STPG1Q5TH74 334 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 OVOS1Q6IE37 1185 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 RINT1Q6NUQ1 792 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 DAW1Q8N136 415 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 CAMKK1Q8N5S9 505 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 KCTD17Q8N5Z5 321 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 TTC8Q8TAM2 541 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 SPIRE2Q8WWL2 714 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 KIF12Q96FN5 646 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 ZBTB45Q96K62 511 aaPredicted RBP13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 DNAJC25Q9H1X3 360 aa13.35□□□□□ -0.27
APOBEC3B-204ENST00000407298 TASP1Q9H6P5 420 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms