RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 TADA2BQ86TJ2 420 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 CCDC60Q8IWA6 550 aaPredicted RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 SCN4BQ8IWT1 228 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 SRRM1Q8IYB3 904 aaKnown RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 RIBC1Q8N443 379 aaPredicted RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 PCSK9Q8NBP7 692 aaKnown RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 EXD1Q8NHP7 514 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 GSDMBQ8TAX9 411 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 DEPDC1BQ8WUY9 529 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 BAP1Q92560 729 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 ARHGEF26Q96DR7 871 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 SCYL1Q96KG9 808 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 GCNAQ96QF7 691 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 MTMR12Q9C0I1 747 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 RAB21Q9UL25 225 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 TPX2Q9ULW0 747 aaKnown RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 HPCAL4Q9UM19 191 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 PCDHGC5Q9Y5F6 944 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 A0A1B0GUA9 196 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 GMNCA6NCL1 334 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 KBTBD13C9JR72 458 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 CDH16O75309 829 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 RALAP11233 206 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 NFKBIAP25963 317 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 ADORA2AP29274 412 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 STIP1P31948 543 aaKnown RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 ARPP19P56211 112 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 MAGOHP61326 146 aaKnown RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 PDIA2Q13087 525 aaKnown RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 GRIK4Q16099 956 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 HIF1AQ16665 826 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 GOLGA7BQ2TAP0 167 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 BEND6Q5SZJ8 279 aaPredicted RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 CEP57Q86XR8 500 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 IRF2BP1Q8IU81 584 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 C1orf131Q8NDD1 294 aaKnown RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 IL31RAQ8NI17 732 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 TRPM4Q8TD43 1214 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 ALKBH8Q96BT7 664 aaKnown RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 GRAMD1AQ96CP6 724 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 CFAP36Q96G28 342 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 MAGEB5Q9BZ81 275 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 CISHQ9NSE2 258 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 PRKAG2Q9UGJ0 569 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 CAPN7Q9Y6W3 813 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 IGLV3-22A0A075B6J6 115 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 A0A087WZ62 844 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 LRRIQ3A6PVS8 624 aaPredicted RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 RASA4BC9J798 803 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 F8W8V4 182 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 COPEO14579 308 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 RASA4O43374 803 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 CASP5P51878 434 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 IRX4P78413 519 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 PTPN11Q06124 597 aaPredicted RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 KCNMA1Q12791 1236 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 ITGB3BPQ13352 177 aaPredicted RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 PDCLQ13371 301 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 PDK2Q15119 407 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 LY6KQ17RY6 165 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 P3H1Q32P28 736 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 C4orf50Q6ZRC1 276 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 RAB44Q7Z6P3 723 aaPredicted RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 SPATA2LQ8IUW3 424 aaPredicted RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 SMC1BQ8NDV3 1235 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 ARHGEF2Q92974 986 aaKnown RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 DDX27Q96GQ7 796 aaKnown RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 RSRC1Q96IZ7 334 aaKnown RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 VPS39Q96JC1 886 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 GLT1D1Q96MS3 346 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 TSPAN18Q96SJ8 248 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 MYCBPQ99417 103 aaPredicted RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 CYTH2Q99418 400 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 FDXACB1Q9BRP7 624 aaPredicted RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 PACSIN1Q9BY11 444 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 FHDC1Q9C0D6 1143 aaPredicted RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 UBN1Q9NPG3 1134 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 TXLNGQ9NUQ3 528 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 L1RE1Q9UN81 338 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 SMG5Q9UPR3 1016 aaKnown RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 TNFSF13BQ9Y275 285 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 DUSP10Q9Y6W6 482 aa4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 ASTN2O75129 1339 aaPredicted RBP4.99□□□□□ -1.61
PCDH11X-207ENST00000406881 FRMD3A2A2Y4 597 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 UNCXA6NJT0 531 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 PI4K2BG5E9Z4 385 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 IRF6O14896 467 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 TGFB1I1O43294 461 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 COL2A1P02458 1487 aaPredicted RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 FAM200BP0CF97 657 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 LCP1P13796 627 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 BRAFP15056 766 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 PAX3P23760 479 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 PPARGP37231 505 aaPredicted RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 CARSP49589 748 aaKnown RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 SULT1E1P49888 294 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 MYL6P60660 151 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 IFT88Q13099 833 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ZNF268Q14587 947 aaPredicted RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ECM1Q16610 540 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms