RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 TSHRP16473 764 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 TAC1P20366 129 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 RFC5P40937 340 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 GTF2A1P52655 376 aaPredicted RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 TAP1Q03518 808 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 MKRN4PQ13434 485 aaPredicted RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 TNFAIP1Q13829 316 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 WDR72Q3MJ13 1102 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 SWSAP1Q6NVH7 229 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 MIS18BP1Q6P0N0 1132 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 TRABD2AQ86V40 505 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 CCDC89Q8N998 374 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 CFAP61Q8NHU2 1237 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 ATG4AQ8WYN0 398 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 ARHGEF2Q92974 986 aaKnown RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 GRAMD1AQ96CP6 724 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 L3MBTL3Q96JM7 780 aaPredicted RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 PLCD4Q9BRC7 762 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 OSBPL8Q9BZF1 889 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 LHX5Q9H2C1 402 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 VEZTQ9HBM0 779 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 PARVAQ9NVD7 372 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 IP6K2Q9UHH9 426 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 ANAPC5Q9UJX4 755 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 AGO2Q9UKV8 859 aaKnown RBP4.1□□□□□ -1.75
RTN4-209ENST00000405240 PTPN22Q9Y2R2 807 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 STARD13Q9Y3M8 1113 aa4.1□□□□□ -1.75
RTN4-209ENST00000405240 hCG_1818297A0A087WSY0 165 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 GSTTP1A0A1W2PQM5 241 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 ZBTB42B2RXF5 422 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 NDC80O14777 642 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 MSCO60682 206 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 CDH16O75309 829 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 MAFO75444 373 aaPredicted RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 LGR5O75473 907 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 ENDOD1O94919 500 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 GAS8O95995 478 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 EGFRP00533 1210 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 IL1BP01584 269 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 OATP04181 439 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 MYCLP12524 364 aaPredicted RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 ATF2P15336 505 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 EIF4BP23588 611 aaKnown RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 FOXN2P32314 431 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 CDKN2BP42772 138 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 NSFP46459 744 aaKnown RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 GABRB2P47870 512 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 WDR4P57081 412 aaKnown RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 OGDHQ02218 1023 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 SLC25A11Q02978 314 aaKnown RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 NFX1Q12986 1120 aaKnown RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 MORF4L2Q15014 288 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 PPP1R7Q15435 360 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 KYNUQ16719 465 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 ZBTB41Q5SVQ8 909 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 RNF187Q5TA31 235 aaPredicted RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 LIN9Q5TKA1 542 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 LLGL2Q6P1M3 1020 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 SH2D5Q6ZV89 423 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 WDR49Q8IV35 697 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 BRSK2Q8IWQ3 736 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 NIM1KQ8IY84 436 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 ARFGAP1Q8N6T3 406 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 GBP7Q8N8V2 638 aaPredicted RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 FNIP1Q8TF40 1166 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 ZNF526Q8TF50 670 aaPredicted RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 ZNF606Q8WXB4 792 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 TTC25Q96NG3 672 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 RXFP1Q9HBX9 757 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 ABCF3Q9NUQ8 709 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 ZNF219Q9P2Y4 722 aaPredicted RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 CTNNAL1Q9UBT7 734 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 AFG3L2Q9Y4W6 797 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 VGLL3A8MV65 326 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 TRAFD1O14545 582 aaPredicted RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 ADCY3O60266 1144 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 ARSEP51690 589 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 SNCBQ16143 134 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 EFHC2Q5JST6 749 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 CIAPIN1Q6FI81 312 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 SPOPLQ6IQ16 392 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 RBBP8NLQ8NC74 664 aaPredicted RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 ZNF280CQ8ND82 737 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 OR5B17Q8NGF7 314 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 PRCCQ92733 491 aaPredicted RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 RBM41Q96IZ5 413 aaKnown RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 IFT74Q96LB3 600 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 CCDC114Q96M63 670 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 WDR83Q9BRX9 315 aaKnown RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 BCO2Q9BYV7 579 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 NSRP1Q9H0G5 558 aaKnown RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 XYLT2Q9H1B5 865 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 CD248Q9HCU0 757 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 DDX56Q9NY93 547 aaKnown RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 ANKFY1Q9P2R3 1169 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 CPSF3Q9UKF6 684 aaKnown RBP4.09□□□□□ -1.75
RTN4-209ENST00000405240 GRID1Q9ULK0 1009 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 ARL2BPQ9Y2Y0 163 aa4.09□□□□□ -1.75
RTN4-209ENST00000405240 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms