RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 PLEKHA5Q9HAU0 1116 aa12.6□□□□□ -0.39
SMS-202ENST00000404933 MRPL47Q9HD33 250 aaKnown RBP12.6□□□□□ -0.39
SMS-202ENST00000404933 ADAM22Q9P0K1 906 aa12.6□□□□□ -0.39
SMS-202ENST00000404933 RSPH14Q9UHP6 348 aa12.6□□□□□ -0.39
SMS-202ENST00000404933 DMGDHQ9UI17 866 aaKnown RBP12.6□□□□□ -0.39
SMS-202ENST00000404933 HPCAL4Q9UM19 191 aa12.6□□□□□ -0.39
SMS-202ENST00000404933 DERAQ9Y315 318 aa12.6□□□□□ -0.39
SMS-202ENST00000404933 TMEM88BA6NKF7 163 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 ZMYND10O75800 440 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 NPTXRO95502 500 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 EIF4BP23588 611 aaKnown RBP12.59□□□□□ -0.39
SMS-202ENST00000404933 RRM1P23921 792 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 CTNNA2P26232 953 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 TNFRSF8P28908 595 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 CTGFP29279 349 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 HOXA11P31270 313 aaPredicted RBP12.59□□□□□ -0.39
SMS-202ENST00000404933 PSMC4P43686 418 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 GYS2P54840 703 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 PURAQ00577 322 aaKnown RBP12.59□□□□□ -0.39
SMS-202ENST00000404933 WDR72Q3MJ13 1102 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 DCAF12L1Q5VU92 463 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 IFT20Q8IY31 132 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 C10orf67Q8IYJ2 551 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 NME8Q8N427 588 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 C7orf31Q8N865 590 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 SMC1BQ8NDV3 1235 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 CXorf38Q8TB03 319 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 DNAJB3Q8WWF6 145 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 CD101Q93033 1021 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 RNPC3Q96LT9 517 aaKnown RBP12.59□□□□□ -0.39
SMS-202ENST00000404933 ZNF518BQ9C0D4 1074 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 CYP3A43Q9HB55 503 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 CDHR5Q9HBB8 845 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 ANAPC7Q9UJX3 599 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 POLIQ9UNA4 740 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 SCINQ9Y6U3 715 aa12.59□□□□□ -0.39
SMS-202ENST00000404933 TREHO43280 583 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 RNF40O75150 1001 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 STAU1O95793 577 aaKnown RBP12.58□□□□□ -0.4
SMS-202ENST00000404933 SYF2O95926 243 aaKnown RBP12.58□□□□□ -0.4
SMS-202ENST00000404933 FGGP02679 453 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 CFHP08603 1231 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 SLC1A1P43005 524 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 YARSP54577 528 aaKnown RBP12.58□□□□□ -0.4
SMS-202ENST00000404933 RBP5P82980 135 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 SLC7A5Q01650 507 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 HIC1Q14526 733 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 PPP2R5EQ16537 467 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 TMEM35BQ8NCS4 154 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 PPP1R13LQ8WUF5 828 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 ALG3Q92685 438 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 KIF12Q96FN5 646 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 BTBD6Q96KE9 485 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 C11orf70Q9BRQ4 267 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 AP1M1Q9BXS5 423 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 FAM124BQ9H5Z6 455 aaPredicted RBP12.58□□□□□ -0.4
SMS-202ENST00000404933 YY1AP1Q9H869 796 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 FAM204AQ9H8W3 233 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 DPP3Q9NY33 737 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 PCDHGC3Q9UN70 934 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 CEP83Q9Y592 693 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 TRIP11Q15643 1979 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 A0A087WUV0 522 aaPredicted RBP12.58□□□□□ -0.4
SMS-202ENST00000404933 GOLGA6L10A0A0M3HER8 536 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 MYO1FO00160 1098 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 MED7O43513 233 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 HEXIM1O94992 359 aaKnown RBP12.58□□□□□ -0.4
SMS-202ENST00000404933 PAEPP09466 180 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 C6orf222P0C671 652 aaPredicted RBP12.58□□□□□ -0.4
SMS-202ENST00000404933 HSPA6P17066 643 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 BRD2P25440 801 aaKnown RBP12.58□□□□□ -0.4
SMS-202ENST00000404933 POLR2BP30876 1174 aaKnown RBP12.58□□□□□ -0.4
SMS-202ENST00000404933 HOXC8P31273 242 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 CTNNA1P35221 906 aaKnown RBP12.58□□□□□ -0.4
SMS-202ENST00000404933 PEX5P50542 639 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 GJA9P57773 515 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 LACTBP83111 547 aaPredicted RBP12.58□□□□□ -0.4
SMS-202ENST00000404933 ZNF394Q53GI3 561 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 MMS22LQ6ZRQ5 1243 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 PAXIP1Q6ZW49 1069 aaPredicted RBP12.58□□□□□ -0.4
SMS-202ENST00000404933 KLHL7Q8IXQ5 586 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 TTC39CQ8N584 583 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 TRPV1Q8NER1 839 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 KRT35Q92764 455 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 HPDLQ96IR7 371 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 ZIC5Q96T25 663 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 SLITRK6Q9H5Y7 841 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 LCMT1Q9UIC8 334 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 AGAP1Q9UPQ3 857 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 PCDHA3Q9Y5H8 950 aa12.58□□□□□ -0.4
SMS-202ENST00000404933 GOLGA8KD6RF30 607 aa12.57□□□□□ -0.4
SMS-202ENST00000404933 OPA1O60313 960 aa12.57□□□□□ -0.4
SMS-202ENST00000404933 CALB1P05937 261 aa12.57□□□□□ -0.4
SMS-202ENST00000404933 CYBAP13498 195 aa12.57□□□□□ -0.4
SMS-202ENST00000404933 MMP8P22894 467 aa12.57□□□□□ -0.4
SMS-202ENST00000404933 SSTR3P32745 418 aaPredicted RBP12.57□□□□□ -0.4
SMS-202ENST00000404933 CDH5P33151 784 aaPredicted RBP12.57□□□□□ -0.4
SMS-202ENST00000404933 CRYBB1P53674 252 aaPredicted RBP12.57□□□□□ -0.4
SMS-202ENST00000404933 MRPS25P82663 173 aaKnown RBP12.57□□□□□ -0.4
SMS-202ENST00000404933 ZNF200P98182 395 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms