RNA–Protein interactions for RNA: ENST00000402876.3

PARVB-202, Transcript of parvin beta, humanhuman

TSL 1 (best)

Gene PARVB, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-202ENST00000402876 SPTLC3Q9NUV7 552 aa20.78■□□□□ 0.92
PARVB-202ENST00000402876 SNX9Q9Y5X1 595 aa20.78■□□□□ 0.92
PARVB-202ENST00000402876 CSF2RAP15509 400 aa20.77■□□□□ 0.92
PARVB-202ENST00000402876 CYP11B1P15538 503 aa20.77■□□□□ 0.92
PARVB-202ENST00000402876 TNFAIP3P21580 790 aa20.77■□□□□ 0.92
PARVB-202ENST00000402876 ITGB8P26012 769 aa20.77■□□□□ 0.92
PARVB-202ENST00000402876 RAP1GAPP47736 663 aa20.77■□□□□ 0.92
PARVB-202ENST00000402876 ZNF132P52740 706 aa20.77■□□□□ 0.92
PARVB-202ENST00000402876 SLC47A2Q86VL8 602 aa20.77■□□□□ 0.92
PARVB-202ENST00000402876 ZNF677Q86XU0 584 aa20.77■□□□□ 0.92
PARVB-202ENST00000402876 TXLNBQ8N3L3 684 aa20.77■□□□□ 0.92
PARVB-202ENST00000402876 ACRBPQ8NEB7 543 aa20.77■□□□□ 0.92
PARVB-202ENST00000402876 SYT11Q9BT88 431 aa20.77■□□□□ 0.92
PARVB-202ENST00000402876 SDCBP2Q9H190 292 aa20.77■□□□□ 0.92
PARVB-202ENST00000402876 NOCTQ9UK39 431 aaKnown RBP20.77■□□□□ 0.92
PARVB-202ENST00000402876 BRCA2P51587 3418 aa20.76■□□□□ 0.91
PARVB-202ENST00000402876 GOLGA6L9A6NEM1 432 aa20.76■□□□□ 0.91
PARVB-202ENST00000402876 CASTOR2A6NHX0 329 aa20.76■□□□□ 0.91
PARVB-202ENST00000402876 CLCNKBP51801 687 aa20.76■□□□□ 0.91
PARVB-202ENST00000402876 LILRA4P59901 499 aa20.76■□□□□ 0.91
PARVB-202ENST00000402876 RNASELQ05823 741 aaKnown RBP20.76■□□□□ 0.91
PARVB-202ENST00000402876 INCA1Q0VD86 236 aa20.76■□□□□ 0.91
PARVB-202ENST00000402876 UPP1Q16831 310 aa20.76■□□□□ 0.91
PARVB-202ENST00000402876 NOP9Q86U38 636 aaKnown RBP20.76■□□□□ 0.91
PARVB-202ENST00000402876 FAM193BQ96PV7 902 aaPredicted RBP20.76■□□□□ 0.91
PARVB-202ENST00000402876 HTATIP2Q9BUP3 242 aa20.76■□□□□ 0.91
PARVB-202ENST00000402876 MRPL9Q9BYD2 267 aaKnown RBP20.76■□□□□ 0.91
PARVB-202ENST00000402876 DNAI2Q9GZS0 605 aa20.76■□□□□ 0.91
PARVB-202ENST00000402876 IL23AQ9NPF7 189 aa20.76■□□□□ 0.91
PARVB-202ENST00000402876 TBC1D13Q9NVG8 400 aa20.76■□□□□ 0.91
PARVB-202ENST00000402876 ADAMTS1Q9UHI8 967 aa20.76■□□□□ 0.91
PARVB-202ENST00000402876 A0A087X0T9 212 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 ZNF500O60304 480 aaPredicted RBP20.75■□□□□ 0.91
PARVB-202ENST00000402876 HUS1O60921 280 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 CILPO75339 1184 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 PAEPP09466 180 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 FAM228BP0C875 321 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 GNA15P30679 374 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 CDH8P55286 799 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 CDR2Q01850 454 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 MLLT1Q03111 559 aaPredicted RBP20.75■□□□□ 0.91
PARVB-202ENST00000402876 GFPT1Q06210 699 aaPredicted RBP20.75■□□□□ 0.91
PARVB-202ENST00000402876 PPIGQ13427 754 aaKnown RBP eCLIP20.75■□□□□ 0.91
PARVB-202ENST00000402876 C10orf76Q5T2E6 689 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 DPH6Q7L8W6 267 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 KIAA1328Q86T90 577 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 CRIPAKQ8N1N5 446 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 C17orf53Q8N3J3 647 aaPredicted RBP20.75■□□□□ 0.91
PARVB-202ENST00000402876 APPL2Q8NEU8 664 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 SLC20A1Q8WUM9 679 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 VWCEQ96DN2 955 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 CASD1Q96PB1 797 aa20.75■□□□□ 0.91
PARVB-202ENST00000402876 TRMT1Q9NXH9 659 aaKnown RBP20.75■□□□□ 0.91
PARVB-202ENST00000402876 BARX2Q9UMQ3 279 aaPredicted RBP20.75■□□□□ 0.91
PARVB-202ENST00000402876 SPTLC1O15269 473 aa20.74■□□□□ 0.91
PARVB-202ENST00000402876 TACC1O75410 805 aa20.74■□□□□ 0.91
PARVB-202ENST00000402876 BAIAP3O94812 1187 aa20.74■□□□□ 0.91
PARVB-202ENST00000402876 AMHP03971 560 aa20.74■□□□□ 0.91
PARVB-202ENST00000402876 FAM163BP0C2L3 166 aa20.74■□□□□ 0.91
PARVB-202ENST00000402876 RGS19P49795 217 aa20.74■□□□□ 0.91
PARVB-202ENST00000402876 CYP27A1Q02318 531 aa20.74■□□□□ 0.91
PARVB-202ENST00000402876 DSC1Q08554 894 aa20.74■□□□□ 0.91
PARVB-202ENST00000402876 GLYCTKQ8IVS8 523 aa20.74■□□□□ 0.91
PARVB-202ENST00000402876 C7orf61Q8IZ16 206 aa20.74■□□□□ 0.91
PARVB-202ENST00000402876 TOP6BLQ8N6T0 577 aa20.74■□□□□ 0.91
PARVB-202ENST00000402876 SEPT11Q9NVA2 429 aaKnown RBP20.74■□□□□ 0.91
PARVB-202ENST00000402876 REXO2Q9Y3B8 237 aaKnown RBP20.74■□□□□ 0.91
PARVB-202ENST00000402876 TSC2P49815 1807 aa20.74■□□□□ 0.91
PARVB-202ENST00000402876 ARHGEF37A1IGU5 675 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 DDX3XO00571 662 aaKnown RBP eCLIP20.73■□□□□ 0.914e-13■■■■□ 22.4
PARVB-202ENST00000402876 ZNF263O14978 683 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 THAP12O43422 761 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 MAGEA1P43355 309 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 SOWAHAQ2M3V2 549 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 CCDC122Q5T0U0 273 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 TAF3Q5VWG9 929 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 ALKBH5Q6P6C2 394 aaKnown RBP20.73■□□□□ 0.91
PARVB-202ENST00000402876 DCLRE1AQ6PJP8 1040 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.73■□□□□ 0.91
PARVB-202ENST00000402876 LIMS2Q7Z4I7 341 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 SLC30A5Q8TAD4 765 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 LNX1Q8TBB1 728 aaPredicted RBP20.73■□□□□ 0.91
PARVB-202ENST00000402876 PPP1R13BQ96KQ4 1090 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 CACNG4Q9UBN1 327 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 PUF60Q9UHX1 559 aaKnown RBP20.73■□□□□ 0.91
PARVB-202ENST00000402876 NAGPAQ9UK23 515 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 PCDHA13Q9Y5I0 950 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 ATP8B3O60423 1300 aa20.73■□□□□ 0.91
PARVB-202ENST00000402876 USP27XA6NNY8 438 aa20.72■□□□□ 0.91
PARVB-202ENST00000402876 CYB561D2O14569 222 aa20.72■□□□□ 0.91
PARVB-202ENST00000402876 MMEP08473 750 aa20.72■□□□□ 0.91
PARVB-202ENST00000402876 CHRNB2P17787 502 aa20.72■□□□□ 0.91
PARVB-202ENST00000402876 AARSP49588 968 aaKnown RBP eCLIP20.72■□□□□ 0.91
PARVB-202ENST00000402876 VAV2P52735 878 aa20.72■□□□□ 0.91
PARVB-202ENST00000402876 RAD23BP54727 409 aa20.72■□□□□ 0.91
PARVB-202ENST00000402876 FMO1Q01740 532 aa20.72■□□□□ 0.91
PARVB-202ENST00000402876 FPGSQ05932 587 aa20.72■□□□□ 0.91
PARVB-202ENST00000402876 ZNF394Q53GI3 561 aa20.72■□□□□ 0.91
PARVB-202ENST00000402876 DSTYKQ6XUX3 929 aa20.72■□□□□ 0.91
PARVB-202ENST00000402876 TRIM72Q6ZMU5 477 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms