RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CBWD1Q9BRT8 395 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 EPN3Q9H201 632 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 GTF3C4Q9UKN8 822 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 PXDNQ92626 1479 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 PFDN1O60925 122 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 DNAJC6O75061 913 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 ACADSBP45954 432 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 HUNKP57058 714 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 RFX8Q6ZV50 586 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 MMGT1Q8N4V1 131 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 EHD4Q9H223 541 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 TMX2Q9Y320 296 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 DNAJC8O75937 253 aaPredicted RBP19.07■□□□□ 0.64
COL18A1-204ENST00000400337 PYGBP11216 843 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 BACE1P56817 501 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 ZNF200P98182 395 aaPredicted RBP19.07■□□□□ 0.64
COL18A1-204ENST00000400337 ACAD10Q6JQN1 1059 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 PPP1R36Q96LQ0 422 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 AIPL1Q9NZN9 384 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 ZC3H4Q9UPT8 1303 aaKnown RBP19.07■□□□□ 0.64
COL18A1-204ENST00000400337 MAGEA4P43358 317 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 ACSF2Q96CM8 615 aaPredicted RBP19.07■□□□□ 0.64
COL18A1-204ENST00000400337 MRPL40Q9NQ50 206 aaKnown RBP19.07■□□□□ 0.64
COL18A1-204ENST00000400337 NCOA3Q9Y6Q9 1424 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 UPP2O95045 317 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 PCSK1P29120 753 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 ACTN3Q08043 901 aaPredicted RBP19.07■□□□□ 0.64
COL18A1-204ENST00000400337 ZIM3Q96PE6 472 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 ISCUQ9H1K1 167 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 PAK5Q9P286 719 aa19.07■□□□□ 0.64
COL18A1-204ENST00000400337 RRN3P2A6NIE6 340 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 SGPL1O95470 568 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 RBBP7Q16576 425 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 TTC23LQ6PF05 361 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 CCT8L2Q96SF2 557 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 RIOX1Q9H6W3 641 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 DUSP10Q9Y6W6 482 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 PHF20L1A8MW92 1017 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 GFAPP14136 432 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 ANO4Q32M45 955 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 C3orf62Q6ZUJ4 267 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 GMCL1P1Q8NEA9 526 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 TRIM54Q9BYV2 358 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 ARL2BPQ9Y2Y0 163 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.06■□□□□ 0.64
COL18A1-204ENST00000400337 NPTX2P47972 431 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 GLB1LQ6UWU2 654 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 SEPT5Q99719 369 aaPredicted RBP19.06■□□□□ 0.64
COL18A1-204ENST00000400337 DDX50Q9BQ39 737 aaKnown RBP19.06■□□□□ 0.64
COL18A1-204ENST00000400337 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.06■□□□□ 0.64
COL18A1-204ENST00000400337 SH3TC2Q8TF17 1288 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 NRBF2Q96F24 287 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 AGXT2Q9BYV1 514 aa19.06■□□□□ 0.64
COL18A1-204ENST00000400337 AP3B1O00203 1094 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 IL1R1P14778 569 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 COILP38432 576 aaPredicted RBP19.05■□□□□ 0.64
COL18A1-204ENST00000400337 ARHGDIAP52565 204 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 ALDH18A1P54886 795 aaKnown RBP19.05■□□□□ 0.64
COL18A1-204ENST00000400337 RBM43Q6ZSC3 357 aaKnown RBP19.05■□□□□ 0.64
COL18A1-204ENST00000400337 ZNF473Q8WTR7 871 aaKnown RBP19.05■□□□□ 0.64
COL18A1-204ENST00000400337 KCNA2P16389 499 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 CUL3Q13618 768 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 PDCD2Q16342 344 aaPredicted RBP19.05■□□□□ 0.64
COL18A1-204ENST00000400337 COBLL1Q53SF7 1204 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 GLRA4Q5JXX5 417 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 NUDT12Q9BQG2 462 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 PREX1Q8TCU6 1659 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 RNF103-CHMP3A0A140T963 221 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 NFIBO00712 420 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 AP2B1P63010 937 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 CENPCQ03188 943 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 C2CD6Q53TS8 623 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 ANKRD7Q92527 254 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 PTPRN2Q92932 1015 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 CARD9Q9H257 536 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 PCMTD2Q9NV79 361 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 CFAP73A6NFT4 308 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 KBTBD13C9JR72 458 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 OGTO15294 1046 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 GAS2O43903 313 aaKnown RBP19.05■□□□□ 0.64
COL18A1-204ENST00000400337 RNF168Q8IYW5 571 aaPredicted RBP19.05■□□□□ 0.64
COL18A1-204ENST00000400337 FAM71DQ8N9W8 422 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 ZC3H15Q8WU90 426 aaKnown RBP19.05■□□□□ 0.64
COL18A1-204ENST00000400337 ZNF512Q96ME7 567 aaPredicted RBP19.05■□□□□ 0.64
COL18A1-204ENST00000400337 KLF6Q99612 283 aaPredicted RBP19.05■□□□□ 0.64
COL18A1-204ENST00000400337 TSSK1BQ9BXA7 367 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 KLK14Q9P0G3 267 aa19.05■□□□□ 0.64
COL18A1-204ENST00000400337 FAM47DPA6NHR8 397 aa19.04■□□□□ 0.64
COL18A1-204ENST00000400337 CELF2O95319 508 aaKnown RBP19.04■□□□□ 0.64
COL18A1-204ENST00000400337 PGK2P07205 417 aa19.04■□□□□ 0.64
COL18A1-204ENST00000400337 CLCN3P51790 818 aa19.04■□□□□ 0.64
COL18A1-204ENST00000400337 KDSRQ06136 332 aa19.04■□□□□ 0.64
COL18A1-204ENST00000400337 PTK7Q13308 1070 aa19.04■□□□□ 0.64
COL18A1-204ENST00000400337 Q4G0T1 1027 aa19.04■□□□□ 0.64
COL18A1-204ENST00000400337 EFHC1Q5JVL4 640 aa19.04■□□□□ 0.64
COL18A1-204ENST00000400337 SLC26A7Q8TE54 656 aa19.04■□□□□ 0.64
COL18A1-204ENST00000400337 NPHS2Q9NP85 383 aa19.04■□□□□ 0.64
COL18A1-204ENST00000400337 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.04■□□□□ 0.642e-6■■■■■ 34.3
COL18A1-204ENST00000400337 ORC1Q13415 861 aa19.04■□□□□ 0.64
COL18A1-204ENST00000400337 USP10Q14694 798 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms