RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 ARHGAP17Q68EM7 881 aa7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 SPOPLQ6IQ16 392 aa7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 GDF6Q6KF10 455 aaPredicted RBP7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 TRAF7Q6Q0C0 670 aa7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 C12orf50Q8NA57 414 aaPredicted RBP7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 SPATA4Q8NEY3 305 aa7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 COG1Q8WTW3 980 aa7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 STK32AQ8WU08 396 aa7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 DNAJB3Q8WWF6 145 aa7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 PPP1R10Q96QC0 940 aaKnown RBP7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 MRPL47Q9HD33 250 aaKnown RBP7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 AMFRQ9UKV5 643 aa7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 PHF24Q9UPV7 400 aa7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 PCDHB4Q9Y5E5 795 aa7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 NLRC5Q86WI3 1866 aa7.29□□□□□ -1.24
CX3CR1-202ENST00000399220 CCDC66A2RUB6 948 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 ENC1O14682 589 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 BUB1O43683 1085 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 PHACTR2O75167 634 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 CALB1P05937 261 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 VDRP11473 427 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 AARSP49588 968 aaKnown RBP eCLIP7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 BEX3Q00994 111 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 ACAP1Q15027 740 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 ELF2Q15723 593 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 CNGA2Q16280 664 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 LHX8Q68G74 356 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 CATSPER4Q7RTX7 472 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 THNSL1Q8IYQ7 743 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 WDTC1Q8N5D0 677 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 SLC4A11Q8NBS3 891 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 SLCO2A1Q92959 643 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 ZSWIM1Q9BR11 485 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 SELENOOQ9BVL4 669 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 SDCBP2Q9H190 292 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 XPNPEP3Q9NQH7 507 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 WDR35Q9P2L0 1181 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 BARX2Q9UMQ3 279 aaPredicted RBP7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 AOC2O75106 756 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 ECM2O94769 699 aaPredicted RBP7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 NPTXRO95502 500 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 TBC1D8O95759 1140 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 SKIP12755 728 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 KIZQ2M2Z5 673 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 SEZ6Q53EL9 994 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 LMBRD2Q68DH5 695 aaPredicted RBP7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 SCARA3Q6AZY7 606 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 LCLAT1Q6UWP7 414 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 CRYBG2Q8N1P7 616 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 BEST2Q8NFU1 509 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 LENG1Q96BZ8 264 aaPredicted RBP7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 OSGEPQ9NPF4 335 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 UBN1Q9NPG3 1134 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 STRIP2Q9ULQ0 834 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 GIT1Q9Y2X7 761 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 SCN1AP35498 2009 aa7.28□□□□□ -1.24
CX3CR1-202ENST00000399220 PSTPIP1O43586 416 aa7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 CHRNA1P02708 482 aa7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 COL6A1P12109 1028 aa7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 WARSP23381 471 aaKnown RBP7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 CCND3P30281 292 aaPredicted RBP7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 YARSP54577 528 aaKnown RBP7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 C9orf57Q5W0N0 161 aa7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 TMEM270Q6UE05 265 aa7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 PEX26Q7Z412 305 aa7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 TOP6BLQ8N6T0 577 aa7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 ZNF564Q8TBZ8 553 aaPredicted RBP7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 TMEM176AQ96HP8 235 aa7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 ZMAT2Q96NC0 199 aaKnown RBP7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 RUNDC3BQ96NL0 473 aa7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 NAP1L3Q99457 506 aaPredicted RBP7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 OSMRQ99650 979 aa7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 EIF2AQ9BY44 585 aaKnown RBP7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 SLITRK6Q9H5Y7 841 aa7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 GDF3Q9NR23 364 aa7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 ALG6Q9Y672 507 aa7.27□□□□□ -1.24
CX3CR1-202ENST00000399220 TULP2O00295 520 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 GPR182O15218 404 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 PROSCO94903 275 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 ERBB2P04626 1255 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 ITGB3P05106 788 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 ASGR1P07306 291 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 PRKAR2AP13861 404 aaKnown RBP7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 PAFAH1B1P43034 410 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 CDK7P50613 346 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 TFAMQ00059 246 aaKnown RBP7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 MYO1EQ12965 1108 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 NNTQ13423 1086 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 ZNF268Q14587 947 aaPredicted RBP7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 KCNA10Q16322 511 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 GNASQ5JWF2 1037 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 LIN9Q5TKA1 542 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 DCAF12L1Q5VU92 463 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 RNF180Q86T96 592 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 VSIG1Q86XK7 387 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 TMEM35BQ8NCS4 154 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 C3orf20Q8ND61 904 aa7.27□□□□□ -1.25
CX3CR1-202ENST00000399220 HPDLQ96IR7 371 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms