RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 PAHP00439 452 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 TMEM11P17152 192 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 CTNNB1P35222 781 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 CAPZA2P47755 286 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 LRRC74AQ0VAA2 488 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 STRIP1Q5VSL9 837 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 KRT35Q92764 455 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 TRIM51Q9BSJ1 452 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 TRIM33Q9UPN9 1127 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 OR6C65A6NJZ3 312 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 BMP10O95393 424 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 TBX4P57082 545 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 IFIT1BQ5T764 474 aaKnown RBP13.37□□□□□ -0.27
CCBE1-201ENST00000398179 HACE1Q8IYU2 909 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 MED30Q96HR3 178 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 ELAC2Q9BQ52 826 aaKnown RBP13.37□□□□□ -0.27
CCBE1-201ENST00000398179 UNKQ9C0B0 810 aaKnown RBP13.37□□□□□ -0.27
CCBE1-201ENST00000398179 RUBCNLQ9H714 662 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.37□□□□□ -0.27
CCBE1-201ENST00000398179 PCDHGA6Q9Y5G7 932 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 ZBTB5O15062 677 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 MICAL2O94851 1124 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 TNNI1P19237 187 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 SARSP49591 514 aaKnown RBP13.37□□□□□ -0.27
CCBE1-201ENST00000398179 ZNF846Q147U1 533 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 STK11Q15831 433 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 R3HCC1LQ7Z5L2 792 aaKnown RBP13.37□□□□□ -0.27
CCBE1-201ENST00000398179 IFNL3Q8IZI9 196 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 UPF1Q92900 1129 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCBE1-201ENST00000398179 ZDHHC12Q96GR4 267 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 KCNS3Q9BQ31 491 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 GNG8Q9UK08 70 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 RBMX2Q9Y388 322 aaKnown RBP13.37□□□□□ -0.27
CCBE1-201ENST00000398179 ABCA10Q8WWZ4 1543 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 SPOPO43791 374 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 TLR1Q15399 786 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 GSTA3Q16772 222 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 CREB3L3Q68CJ9 461 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 LRRC31Q6UY01 552 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 SGK3Q96BR1 496 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 FAM96AQ9H5X1 160 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 NSMCE4AQ9NXX6 385 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 TMEM98Q9Y2Y6 226 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 RFC5P40937 340 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 TBC1D8BQ0IIM8 1120 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 GIT2Q14161 759 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 PPP2R5DQ14738 602 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 ARID5BQ14865 1188 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 C16orf86Q6ZW13 317 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 BTBD6Q96KE9 485 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 YIPF2Q9BWQ6 316 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 EPB41L1Q9H4G0 881 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 PTPN22Q9Y2R2 807 aa13.37□□□□□ -0.27
CCBE1-201ENST00000398179 HMGN1P05114 100 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 PET100P0DJ07 73 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 CAPZA1P52907 286 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 KLHL30Q0D2K2 578 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 MCMDC2Q4G0Z9 681 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 BEND3Q5T5X7 828 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 KRT40Q6A162 431 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 KLHL24Q6TFL4 600 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 CCDC81Q6ZN84 652 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 CCDC116Q8IYX3 515 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 TGFBRAP1Q8WUH2 860 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 KCNB2Q92953 911 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 COG8Q96MW5 612 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 RAD18Q9NS91 495 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 EXD2Q9NVH0 621 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 BHMG1C9JSJ3 638 aaPredicted RBP13.36□□□□□ -0.27
CCBE1-201ENST00000398179 CLEC3BP05452 202 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 NCF2P19878 526 aaPredicted RBP13.36□□□□□ -0.27
CCBE1-201ENST00000398179 ASMTP46597 345 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 TMPRSS15P98073 1019 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 PDE4BQ07343 736 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 CHAF1BQ13112 559 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 KLHL38Q2WGJ6 581 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 BSPRYQ5W0U4 402 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 SMYD1Q8NB12 490 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 GPATCH1Q9BRR8 931 aaKnown RBP13.36□□□□□ -0.27
CCBE1-201ENST00000398179 EHD4Q9H223 541 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 SLC12A6Q9UHW9 1150 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 ANAPC2Q9UJX6 822 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 PCDHGA10Q9Y5H3 936 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 PPP2R3BQ9Y5P8 575 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 TSTD3H0UI37 97 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 VILLO15195 856 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 KLHL2O95198 593 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 ABCB1P08183 1280 aaPredicted RBP13.36□□□□□ -0.27
CCBE1-201ENST00000398179 CNTFP26441 200 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 IL12AP29459 219 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 PRIM2P49643 509 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 BIKQ13323 160 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 C1QTNF12Q5T7M4 302 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 NLRP10Q86W26 655 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 NPLOC4Q8TAT6 608 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 CORO2AQ92828 525 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 LPIN3Q9BQK8 851 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 DDX18Q9NVP1 670 aaKnown RBP13.36□□□□□ -0.27
CCBE1-201ENST00000398179 UVRAGQ9P2Y5 699 aa13.36□□□□□ -0.27
CCBE1-201ENST00000398179 ARHGEF15O94989 841 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms