RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 VSIG1Q86XK7 387 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 IL31RAQ8NI17 732 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 SLCO2A1Q92959 643 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 AZIN2Q96A70 460 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 MMADHCQ9H3L0 296 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 KCNH7Q9NS40 1196 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 USP20Q9Y2K6 914 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 SLC4A7Q9Y6M7 1214 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 TCP10L2B9ZVM9 353 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 H0Y3Z8 333 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 KCNA3P22001 575 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 RNASELQ05823 741 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 PTK6Q13882 451 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 ZRSR2Q15696 482 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 KRT39Q6A163 491 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 CGB2Q6NT52 195 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 TTLL6Q8N841 843 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 DDX1Q92499 740 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 C9orf72Q96LT7 481 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 NT5C1BQ96P26 610 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 RIT2Q99578 217 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 PI4K2AQ9BTU6 479 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 DCLK3Q9C098 648 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 RANBP17Q9H2T7 1088 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 SIGLEC16A6NMB1 481 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 GAS8O95995 478 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 ADSSP30520 456 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 GTF2BQ00403 316 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 ANKRD23Q86SG2 305 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 LDHDQ86WU2 507 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 PPP1R12CQ9BZL4 782 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 MYLK2Q9H1R3 596 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 CLRN2A0PK11 232 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 GRIN3BO60391 1043 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 RAD17O75943 681 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 MAPTP10636 758 aaKnown RBP16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 SCNN1BP51168 640 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 OCRLQ01968 901 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 MTFR1Q15390 333 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 CLEC16AQ2KHT3 1053 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 FAM102BQ5T8I3 360 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 FAM47EQ6ZV65 393 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 RTKN2Q8IZC4 609 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 LRRC8CQ8TDW0 803 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 CPA5Q8WXQ8 436 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 NCSTNQ92542 709 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 TMOD2Q9NZR1 351 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 ZNF70Q9UC06 446 aaPredicted RBP16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 RGS17Q9UGC6 210 aaPredicted RBP16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 NAALADL1Q9UQQ1 740 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 CNTNAP1P78357 1384 aa16.9■□□□□ 0.3
CHMP1A-201ENST00000397901 ZNFX1Q9P2E3 1918 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 ATP9AO75110 1047 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 GJC1P36383 396 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 SERPINB4P48594 390 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 RASSF2P50749 326 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 TTC8Q8TAM2 541 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 FAM151AQ8WW52 585 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 TRAIPQ9BWF2 469 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 NKIRAS1Q9NYS0 192 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 COL20A1Q9P218 1284 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 TMX2Q9Y320 296 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 TJP3O95049 919 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 RRM1P23921 792 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 YWHABP31946 246 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 SFSWAPQ12872 951 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 SPP2Q13103 211 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 UGCGQ16739 394 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 PLA2G4FQ68DD2 849 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 TBC1D10AQ9BXI6 508 aa16.89■□□□□ 0.29
CHMP1A-201ENST00000397901 GSTTP1A0A1W2PQM5 241 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 DHX15O43143 795 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 RALAP11233 206 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 QARSP47897 775 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 POLGP54098 1239 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 TMED2Q15363 201 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 CCDC6Q16204 474 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 DBN1Q16643 649 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 CYP4F22Q6NT55 531 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 FBXL13Q8NEE6 735 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 GRK7Q8WTQ7 553 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 CHURC1Q8WUH1 139 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 GATA6Q92908 595 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 MAGEB18Q96M61 343 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 AGBL1Q96MI9 1066 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 OCEL1Q9H607 264 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 TMEM8AQ9HCN3 771 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 RAB20Q9NX57 234 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 HAO1Q9UJM8 370 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 MAPK13O15264 365 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 TARSP26639 723 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 FOXN2P32314 431 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 GPC3P51654 580 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 DLGAP5Q15398 846 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 SPDYE2Q495Y8 402 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 ARHGEF18Q6ZSZ5 1173 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 ERP27Q96DN0 273 aa16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 DENND2DQ9H6A0 471 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 ZNF277Q9NRM2 450 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-201ENST00000397901 GALNT8Q9NY28 637 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms