RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 DSEQ9UL01 958 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 CXorf51AA0A1B0GTR3 108 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 CCDC189A1A4V9 331 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 ZBTB42B2RXF5 422 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 VSNL1P62760 191 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 FRG1Q14331 258 aaKnown RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 MON1BQ7L1V2 547 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 TMEM110Q86TL2 294 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 OPTNQ96CV9 577 aa6.23□□□□□ -1.41
PTPRD-206ENST00000397617 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 CNOT8Q9UFF9 292 aaKnown RBP6.23□□□□□ -1.41
PTPRD-206ENST00000397617 ATP5BP06576 529 aaKnown RBP6.22□□□□□ -1.41
PTPRD-206ENST00000397617 ZNF564Q8TBZ8 553 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-206ENST00000397617 PLEKHO2Q8TD55 490 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 U2AF1L4Q8WU68 220 aaKnown RBP6.22□□□□□ -1.41
PTPRD-206ENST00000397617 PLXNB2O15031 1838 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 KNL1Q8NG31 2342 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 MACROD2A1Z1Q3 448 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 KRIT1O00522 736 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 PHACTR2O75167 634 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 GABRB2P47870 512 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 TPRNQ4KMQ1 711 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 CHADLQ6NUI6 762 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 PXYLP1Q8TE99 480 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 SLC4A5Q9BY07 1137 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 SNUPNO95149 360 aaKnown RBP6.22□□□□□ -1.41
PTPRD-206ENST00000397617 CNTN2Q02246 1040 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 ZYXQ15942 572 aaKnown RBP6.22□□□□□ -1.41
PTPRD-206ENST00000397617 HSDL1Q3SXM5 330 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 TAPT1Q6NXT6 567 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 B4GALNT4Q76KP1 1039 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 TOP6BLQ8N6T0 577 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 ZNF653Q96CK0 615 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 OTUD5Q96G74 571 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 C16orf70Q9BSU1 422 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 ADAM21Q9UKJ8 722 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 DDNO94850 711 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-206ENST00000397617 NR2C2P49116 596 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 ELAVL2Q12926 359 aaKnown RBP6.22□□□□□ -1.41
PTPRD-206ENST00000397617 KLF1Q13351 362 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-206ENST00000397617 PDCD11Q14690 1871 aaKnown RBP6.22□□□□□ -1.41
PTPRD-206ENST00000397617 ZBTB6Q15916 424 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 CRELD2Q6UXH1 353 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-206ENST00000397617 STRADAQ7RTN6 431 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 ZNF276Q8N554 614 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 C18orf8Q96DM3 657 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 MAML3Q96JK9 1138 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 TSEN34Q9BSV6 310 aaKnown RBP6.22□□□□□ -1.41
PTPRD-206ENST00000397617 CDT1Q9H211 546 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 PCDH9Q9HC56 1237 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 MAFFQ9ULX9 164 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 SPOPO43791 374 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 MLNP12872 115 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 PCSK1P29120 753 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 YARSP54577 528 aaKnown RBP6.22□□□□□ -1.41
PTPRD-206ENST00000397617 KCNA1Q09470 495 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 FAM47CQ5HY64 1035 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 METTL13Q8N6R0 699 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 BEST2Q8NFU1 509 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 VAT1Q99536 393 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 HESX1Q9UBX0 185 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 SHROOM3Q8TF72 1996 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 RCCD1A6NED2 376 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 C9IYK1 514 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 CILPO75339 1184 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 CRYBB1P53674 252 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-206ENST00000397617 GJA9P57773 515 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 AMHR2Q16671 573 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 PPP1R15BQ5SWA1 713 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 SLC51AQ86UW1 340 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 NTAN1Q96AB6 310 aa6.22□□□□□ -1.41
PTPRD-206ENST00000397617 CNMDO75829 334 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 AGTP01019 485 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 DNAJB1P25685 340 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 HCAR3P49019 387 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 MBTD1Q05BQ5 628 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 GFPT1Q06210 699 aaPredicted RBP6.21□□□□□ -1.41
PTPRD-206ENST00000397617 MORF4L2Q15014 288 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 UGCGQ16739 394 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 ZNF699Q32M78 642 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 C6orf118Q5T5N4 469 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 PDZD4Q76G19 769 aaPredicted RBP6.21□□□□□ -1.41
PTPRD-206ENST00000397617 NCAPG2Q86XI2 1143 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 RNF149Q8NC42 400 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 RBBP8NLQ8NC74 664 aaPredicted RBP6.21□□□□□ -1.41
PTPRD-206ENST00000397617 SLC35G2Q8TBE7 412 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 NT5C1AQ9BXI3 368 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 PPP1R1BQ9UD71 204 aaPredicted RBP6.21□□□□□ -1.41
PTPRD-206ENST00000397617 GNEQ9Y223 722 aaKnown RBP6.21□□□□□ -1.41
PTPRD-206ENST00000397617 PDE2AO00408 941 aaPredicted RBP6.21□□□□□ -1.41
PTPRD-206ENST00000397617 CA12O43570 354 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 SORBS3O60504 671 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 HSF2BPO75031 334 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 ZNF568Q3ZCX4 644 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 MTERF2Q49AM1 385 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 NOP9Q86U38 636 aaKnown RBP6.21□□□□□ -1.41
PTPRD-206ENST00000397617 FEZF2Q8TBJ5 459 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 FATE1Q969F0 183 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 SGSM3Q96HU1 749 aa6.21□□□□□ -1.41
PTPRD-206ENST00000397617 ZNF670Q9BS34 389 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 795.3 ms