RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 ZSCAN30Q86W11 494 aa22.66■■□□□ 1.22
CPNE1-204ENST00000397443 ACRBPQ8NEB7 543 aa22.66■■□□□ 1.22
CPNE1-204ENST00000397443 KANSL3Q9P2N6 904 aa22.66■■□□□ 1.22
CPNE1-204ENST00000397443 HMGXB4Q9UGU5 601 aa22.66■■□□□ 1.22
CPNE1-204ENST00000397443 PUF60Q9UHX1 559 aaKnown RBP22.66■■□□□ 1.22
CPNE1-204ENST00000397443 EPN1Q9Y6I3 576 aaPredicted RBP22.66■■□□□ 1.22
CPNE1-204ENST00000397443 I3L4J1 428 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 NDUFA10O95299 355 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 PRKCIP41743 596 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 OR1G1P47890 313 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 KIF11P52732 1056 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 WDR5P61964 334 aaKnown RBP22.65■■□□□ 1.22
CPNE1-204ENST00000397443 GFPT1Q06210 699 aaPredicted RBP22.65■■□□□ 1.22
CPNE1-204ENST00000397443 PPIGQ13427 754 aaKnown RBP eCLIP22.65■■□□□ 1.225e-12■■□□□ 13.5
CPNE1-204ENST00000397443 ZNF365Q70YC5 407 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 FMNL3Q8IVF7 1028 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 UBR7Q8N806 425 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 MRPL45Q9BRJ2 306 aaKnown RBP22.65■■□□□ 1.22
CPNE1-204ENST00000397443 TRMT1Q9NXH9 659 aaKnown RBP22.65■■□□□ 1.22
CPNE1-204ENST00000397443 ADAMTS1Q9UHI8 967 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 LAMA2P24043 3122 aaKnown RBP22.65■■□□□ 1.22
CPNE1-204ENST00000397443 HOXA2O43364 376 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 AMHP03971 560 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 PFKMP08237 780 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 SSTR3P32745 418 aaPredicted RBP22.65■■□□□ 1.22
CPNE1-204ENST00000397443 RPL9P32969 192 aaKnown RBP22.65■■□□□ 1.22
CPNE1-204ENST00000397443 CYLC1P35663 651 aaPredicted RBP22.65■■□□□ 1.22
CPNE1-204ENST00000397443 PDE6CP51160 858 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 CYP27A1Q02318 531 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 SOWAHAQ2M3V2 549 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 NOP9Q86U38 636 aaKnown RBP22.65■■□□□ 1.22
CPNE1-204ENST00000397443 JAKMIP2Q96AA8 810 aa22.65■■□□□ 1.22
CPNE1-204ENST00000397443 PRG3Q9Y2Y8 225 aaPredicted RBP22.65■■□□□ 1.22
CPNE1-204ENST00000397443 BZW2Q9Y6E2 419 aaKnown RBP22.65■■□□□ 1.22
CPNE1-204ENST00000397443 CEP290O15078 2479 aa22.64■■□□□ 1.21
CPNE1-204ENST00000397443 CYP11B1P15538 503 aa22.64■■□□□ 1.21
CPNE1-204ENST00000397443 MSNP26038 577 aaKnown RBP22.64■■□□□ 1.21
CPNE1-204ENST00000397443 EPHB4P54760 987 aa22.64■■□□□ 1.21
CPNE1-204ENST00000397443 YWHAEP62258 255 aaKnown RBP22.64■■□□□ 1.21
CPNE1-204ENST00000397443 FAM43BQ6ZT52 329 aaPredicted RBP22.64■■□□□ 1.21
CPNE1-204ENST00000397443 EPS8L1Q8TE68 723 aa22.64■■□□□ 1.21
CPNE1-204ENST00000397443 CYB561D2O14569 222 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 HUS1O60921 280 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 ITGB1P05556 798 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 BRCC3P46736 316 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 KCNJ6P48051 423 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 MAPK8IP2Q13387 824 aaPredicted RBP22.63■■□□□ 1.21
CPNE1-204ENST00000397443 LTBP2Q14767 1821 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 DSTYKQ6XUX3 929 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 GLYCTKQ8IVS8 523 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 COLGALT2Q8IYK4 626 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 CCDC170Q8IYT3 715 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 KIAA1524Q8TCG1 905 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 DDX27Q96GQ7 796 aaKnown RBP22.63■■□□□ 1.21
CPNE1-204ENST00000397443 TWNKQ96RR1 684 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 CYP3A43Q9HB55 503 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 L1RE1Q9UN81 338 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 TIMM13Q9Y5L4 95 aaPredicted RBP22.63■■□□□ 1.21
CPNE1-204ENST00000397443 SSU72P8A0A1W2PR75 194 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 KIF4AO95239 1232 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 FGBP02675 491 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 PBX3P40426 434 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 NDST1P52848 882 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 DSC1Q08554 894 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 APPL2Q8NEU8 664 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 SENP8Q96LD8 212 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 NRDE2Q9H7Z3 1164 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 RNF216Q9NWF9 866 aaPredicted RBP22.63■■□□□ 1.21
CPNE1-204ENST00000397443 GDAP2Q9NXN4 497 aa22.63■■□□□ 1.21
CPNE1-204ENST00000397443 A0A087X0T9 212 aa22.62■■□□□ 1.21
CPNE1-204ENST00000397443 USP27XA6NNY8 438 aa22.62■■□□□ 1.21
CPNE1-204ENST00000397443 HCRTO43612 131 aa22.62■■□□□ 1.21
CPNE1-204ENST00000397443 CILPO75339 1184 aa22.62■■□□□ 1.21
CPNE1-204ENST00000397443 MMEP08473 750 aa22.62■■□□□ 1.21
CPNE1-204ENST00000397443 FAM228BP0C875 321 aa22.62■■□□□ 1.21
CPNE1-204ENST00000397443 GNA15P30679 374 aa22.62■■□□□ 1.21
CPNE1-204ENST00000397443 ASTE1Q2TB18 679 aaPredicted RBP22.62■■□□□ 1.21
CPNE1-204ENST00000397443 DPH6Q7L8W6 267 aa22.62■■□□□ 1.21
CPNE1-204ENST00000397443 DNAAF5Q86Y56 855 aa22.62■■□□□ 1.21
CPNE1-204ENST00000397443 OR6B3Q8NGW1 331 aa22.62■■□□□ 1.21
CPNE1-204ENST00000397443 TOP1MTQ969P6 601 aa22.62■■□□□ 1.21
CPNE1-204ENST00000397443 UROC1Q96N76 676 aa22.62■■□□□ 1.21
CPNE1-204ENST00000397443 AGPAT1Q99943 283 aa22.62■■□□□ 1.21
CPNE1-204ENST00000397443 NOCTQ9UK39 431 aaKnown RBP22.62■■□□□ 1.21
CPNE1-204ENST00000397443 FNDC1Q4ZHG4 1894 aaPredicted RBP22.62■■□□□ 1.21
CPNE1-204ENST00000397443 THAP12O43422 761 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 TNFAIP3P21580 790 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 TIGD5Q53EQ6 642 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 VPS36Q86VN1 386 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 WHAMMQ8TF30 809 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 FAXDC2Q96IV6 333 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.61■■□□□ 1.214e-13■■■■■ 56.2
CPNE1-204ENST00000397443 ELOVL4Q9GZR5 314 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 BARX2Q9UMQ3 279 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-204ENST00000397443 CNTN6Q9UQ52 1028 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-204ENST00000397443 A0A0U1RQJ8 604 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 TMCO5BA8MYB1 307 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 NT5C1B-RDH14C9J2C7 533 aa22.61■■□□□ 1.21
CPNE1-204ENST00000397443 ZNF263O14978 683 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms