RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 ECM2O94769 699 aaPredicted RBP25.21■■□□□ 1.63
PABPN1-202ENST00000397276 ACSL3O95573 720 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 TGFB3P10600 412 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 CHKAP35790 457 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 MAPK6Q16659 721 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 PREPLQ4J6C6 727 aaPredicted RBP25.21■■□□□ 1.63
PABPN1-202ENST00000397276 KAZNQ674X7 775 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 GIMAP7Q8NHV1 300 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 SPATA33Q96N06 139 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 RUNDC3BQ96NL0 473 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 PPP1R16BQ96T49 567 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 MCM8Q9UJA3 840 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 GGA2Q9UJY4 613 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 TPX2Q9ULW0 747 aaKnown RBP25.21■■□□□ 1.63
PABPN1-202ENST00000397276 SUFUQ9UMX1 484 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 RGS16O15492 202 aaPredicted RBP25.21■■□□□ 1.63
PABPN1-202ENST00000397276 B4GALT5O43286 388 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 CNMDO75829 334 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 SCTRP47872 440 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 ZPBP2Q6X784 338 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 DCLK3Q9C098 648 aa25.21■■□□□ 1.63
PABPN1-202ENST00000397276 INO80B-WBP1J3KQ70 363 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 TP73O15350 636 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 FAM189A1O60320 539 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 GBP1P32455 592 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 PTP4A2Q12974 167 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 SPDYCQ5MJ68 293 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 IER5Q5VY09 327 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 RHOT1Q8IXI2 618 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 TLCD1Q96CP7 247 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 INO80BQ9C086 356 aaPredicted RBP25.2■■□□□ 1.62
PABPN1-202ENST00000397276 CCDC113Q9H0I3 377 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 ASS1P00966 412 aaKnown RBP25.2■■□□□ 1.62
PABPN1-202ENST00000397276 RARGP13631 454 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 TRPC3Q13507 836 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 PLCB4Q15147 1175 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 TRIM72Q6ZMU5 477 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 CISHQ9NSE2 258 aa25.2■■□□□ 1.62
PABPN1-202ENST00000397276 ZBTB42B2RXF5 422 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 SOCS7O14512 581 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 ADCY8P40145 1251 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 EFNA5P52803 228 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 IGBP1P78318 339 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 SLMAPQ14BN4 828 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 CCDC38Q502W7 563 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 PLEKHA7Q6IQ23 1121 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 PHF13Q86YI8 300 aaPredicted RBP25.19■■□□□ 1.62
PABPN1-202ENST00000397276 WDR49Q8IV35 697 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 ZBTB8OSQ8IWT0 167 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 DHX37Q8IY37 1157 aaKnown RBP25.19■■□□□ 1.62
PABPN1-202ENST00000397276 FEZF2Q8TBJ5 459 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 ACSF2Q96CM8 615 aaPredicted RBP25.19■■□□□ 1.62
PABPN1-202ENST00000397276 NXF1Q9UBU9 619 aaKnown RBP25.19■■□□□ 1.62
PABPN1-202ENST00000397276 KRT10P13645 584 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 SNCBQ16143 134 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 CPLX4Q7Z7G2 160 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 CACNA2D3Q8IZS8 1091 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 N4BP2L2Q92802 583 aaPredicted RBP25.19■■□□□ 1.62
PABPN1-202ENST00000397276 CDC42EP4Q9H3Q1 356 aaKnown RBP25.19■■□□□ 1.62
PABPN1-202ENST00000397276 PDGFCQ9NRA1 345 aa25.19■■□□□ 1.62
PABPN1-202ENST00000397276 OGTO15294 1046 aa25.18■■□□□ 1.62
PABPN1-202ENST00000397276 CLCN3P51790 818 aa25.18■■□□□ 1.62
PABPN1-202ENST00000397276 ITGA8P53708 1063 aa25.18■■□□□ 1.62
PABPN1-202ENST00000397276 ADCY2Q08462 1091 aa25.18■■□□□ 1.62
PABPN1-202ENST00000397276 DUOXA2Q1HG44 320 aa25.18■■□□□ 1.62
PABPN1-202ENST00000397276 OSBPL8Q9BZF1 889 aa25.18■■□□□ 1.62
PABPN1-202ENST00000397276 MAF1Q9H063 256 aa25.18■■□□□ 1.62
PABPN1-202ENST00000397276 PARVAQ9NVD7 372 aa25.18■■□□□ 1.62
PABPN1-202ENST00000397276 A0A0G2JLL6 359 aaPredicted RBP25.18■■□□□ 1.62
PABPN1-202ENST00000397276 KRT19P08727 400 aa25.18■■□□□ 1.62
PABPN1-202ENST00000397276 IREB2P48200 963 aaKnown RBP25.18■■□□□ 1.62
PABPN1-202ENST00000397276 CELF3Q5SZQ8 465 aaKnown RBP25.18■■□□□ 1.62
PABPN1-202ENST00000397276 PRRT2Q7Z6L0 340 aaPredicted RBP25.18■■□□□ 1.62
PABPN1-202ENST00000397276 FGD4Q96M96 766 aa25.18■■□□□ 1.62
PABPN1-202ENST00000397276 MCEEQ96PE7 176 aa25.18■■□□□ 1.62
PABPN1-202ENST00000397276 AAASQ9NRG9 546 aa25.18■■□□□ 1.62
PABPN1-202ENST00000397276 RBPJLQ9UBG7 517 aa25.18■■□□□ 1.62
PABPN1-202ENST00000397276 CNTN6Q9UQ52 1028 aa25.18■■□□□ 1.62
PABPN1-202ENST00000397276 WDR90Q96KV7 1748 aa25.17■■□□□ 1.62
PABPN1-202ENST00000397276 LONRF1Q17RB8 773 aa25.17■■□□□ 1.62
PABPN1-202ENST00000397276 CYP4A22Q5TCH4 519 aa25.17■■□□□ 1.62
PABPN1-202ENST00000397276 EP400NLQ6ZTU2 488 aa25.17■■□□□ 1.62
PABPN1-202ENST00000397276 TMEM192Q8IY95 271 aa25.17■■□□□ 1.62
PABPN1-202ENST00000397276 KIRREL3Q8IZU9 778 aa25.17■■□□□ 1.62
PABPN1-202ENST00000397276 SCINQ9Y6U3 715 aa25.17■■□□□ 1.62
PABPN1-202ENST00000397276 TMEM191BP0C7N4 346 aa25.17■■□□□ 1.62
PABPN1-202ENST00000397276 ORC1Q13415 861 aa25.17■■□□□ 1.62
PABPN1-202ENST00000397276 GPAT2Q6NUI2 795 aa25.17■■□□□ 1.62
PABPN1-202ENST00000397276 FAM167AQ96KS9 214 aa25.17■■□□□ 1.62
PABPN1-202ENST00000397276 ADARB2Q9NS39 739 aaKnown RBP25.17■■□□□ 1.62
PABPN1-202ENST00000397276 SRRM3A6NNA2 597 aaPredicted RBP25.16■■□□□ 1.62
PABPN1-202ENST00000397276 F8VP50 259 aa25.16■■□□□ 1.62
PABPN1-202ENST00000397276 ATF7P17544 494 aaPredicted RBP25.16■■□□□ 1.62
PABPN1-202ENST00000397276 MMP8P22894 467 aa25.16■■□□□ 1.62
PABPN1-202ENST00000397276 ELF1P32519 619 aa25.16■■□□□ 1.62
PABPN1-202ENST00000397276 PSEN1P49768 467 aa25.16■■□□□ 1.62
PABPN1-202ENST00000397276 C1QBPQ07021 282 aaKnown RBP25.16■■□□□ 1.62
PABPN1-202ENST00000397276 MXD4Q14582 209 aaPredicted RBP25.16■■□□□ 1.62
PABPN1-202ENST00000397276 KCTD2Q14681 263 aa25.16■■□□□ 1.62
PABPN1-202ENST00000397276 GJC2Q5T442 439 aaPredicted RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms