RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 NOL4O94818 638 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 CST3P01034 146 aaPredicted RBP15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 ATP1A1P05023 1023 aaKnown RBP15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 ITGB3P05106 788 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 SYN1P17600 705 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 IBSPP21815 317 aaPredicted RBP15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 PSRC1Q6PGN9 363 aaPredicted RBP15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 HELQQ8TDG4 1101 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 EXOC4Q96A65 974 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 C18orf25Q96B23 403 aaPredicted RBP15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 RPGRIP1Q96KN7 1286 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 GANQ9H2C0 597 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 FAM207AQ9NSI2 230 aaPredicted RBP15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 CEP72Q9P209 647 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 DAAM1Q9Y4D1 1078 aa15.9■□□□□ 0.14
TM9SF1-202ENST00000396854 ANO9A1A5B4 782 aa15.89■□□□□ 0.13
TM9SF1-202ENST00000396854 IPO7O95373 1038 aaKnown RBP15.89■□□□□ 0.13
TM9SF1-202ENST00000396854 FGFR1P11362 822 aa15.89■□□□□ 0.13
TM9SF1-202ENST00000396854 LRPAP1P30533 357 aa15.89■□□□□ 0.13
TM9SF1-202ENST00000396854 WDR5P61964 334 aaKnown RBP15.89■□□□□ 0.13
TM9SF1-202ENST00000396854 SOX4Q06945 474 aaPredicted RBP15.89■□□□□ 0.13
TM9SF1-202ENST00000396854 TRPC3Q13507 836 aa15.89■□□□□ 0.13
TM9SF1-202ENST00000396854 KLHDC7AQ5VTJ3 777 aa15.89■□□□□ 0.13
TM9SF1-202ENST00000396854 BAP1Q92560 729 aa15.89■□□□□ 0.13
TM9SF1-202ENST00000396854 VRTNQ9H8Y1 702 aa15.89■□□□□ 0.13
TM9SF1-202ENST00000396854 APEX2Q9UBZ4 518 aa15.89■□□□□ 0.13
TM9SF1-202ENST00000396854 ZMYND8Q9ULU4 1186 aaPredicted RBP15.89■□□□□ 0.13
TM9SF1-202ENST00000396854 STAU1O95793 577 aaKnown RBP15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 ASS1P00966 412 aaKnown RBP15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 AMHP03971 560 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 RFX1P22670 979 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 GUCY2FP51841 1108 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 CKAP4Q07065 602 aaKnown RBP15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 NOMO2Q5JPE7 1267 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 SCARA3Q6AZY7 606 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 URGCPQ8TCY9 931 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 TSGA10Q9BZW7 698 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 XYLT2Q9H1B5 865 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 KANSL3Q9P2N6 904 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 RCCD1A6NED2 376 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 ENC1O14682 589 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 FGBP02675 491 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 MCM3P25205 808 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 POLR2BP30876 1174 aaKnown RBP15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 ATICP31939 592 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 EPHB4P54760 987 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 MYL6P60660 151 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 RBP5P82980 135 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 APBA1Q02410 837 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 CASP8Q14790 479 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 SGSM1Q2NKQ1 1148 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 TMEM240Q5SV17 173 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 PDXDC1Q6P996 788 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 TMEM130Q8N3G9 435 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 TAF4BQ92750 862 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 TOP1MTQ969P6 601 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 NT5C1BQ96P26 610 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 IMPG2Q9BZV3 1241 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 LACRTQ9GZZ8 138 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 TFR2Q9UP52 801 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 INPP5FQ9Y2H2 1132 aa15.88■□□□□ 0.13
TM9SF1-202ENST00000396854 TARSL2A2RTX5 802 aaKnown RBP15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 PIRO00625 290 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 POMCP01189 267 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 KRT19P08727 400 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 UCHL3P15374 230 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 VAV2P52735 878 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 NOP14P78316 857 aaKnown RBP15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 WDR44Q5JSH3 913 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 C9orf57Q5W0N0 161 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 PHLDB3Q6NSJ2 640 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 ZNF365Q70YC5 407 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 OTOP2Q7RTS6 562 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 ABI1Q8IZP0 508 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 LRRC52Q8N7C0 313 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 CASD1Q96PB1 797 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 LBHD1Q9BQE6 289 aaPredicted RBP15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 PI4K2AQ9BTU6 479 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 NUCKS1Q9H1E3 243 aaKnown RBP15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 ADAM21Q9UKJ8 722 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 AGAP1Q9UPQ3 857 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 NR2E3Q9Y5X4 410 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 DEFB103AP81534 67 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 TUSC3Q13454 348 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 SYN2Q92777 582 aaPredicted RBP15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 FAXDC2Q96IV6 333 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 MMS19Q96T76 1030 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 MRPL9Q9BYD2 267 aaKnown RBP15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 GOLGA2P5Q9HBQ8 144 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 APOBEC3GQ9HC16 384 aaKnown RBP15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 TBC1D13Q9NVG8 400 aa15.87■□□□□ 0.13
TM9SF1-202ENST00000396854 DGKIO75912 1065 aa15.86■□□□□ 0.13
TM9SF1-202ENST00000396854 GCNT1Q02742 428 aa15.86■□□□□ 0.13
TM9SF1-202ENST00000396854 DSC1Q08554 894 aa15.86■□□□□ 0.13
TM9SF1-202ENST00000396854 ZNF699Q32M78 642 aa15.86■□□□□ 0.13
TM9SF1-202ENST00000396854 ARHGEF19Q8IW93 802 aa15.86■□□□□ 0.13
TM9SF1-202ENST00000396854 HERVK_113Q902F9 699 aa15.86■□□□□ 0.13
TM9SF1-202ENST00000396854 FAM81BQ96LP2 452 aa15.86■□□□□ 0.13
TM9SF1-202ENST00000396854 VIPAS39Q9H9C1 493 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms