RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 KPNA6O60684 536 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 ATP5HO75947 161 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 SGPL1O95470 568 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 VAV1P15498 845 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 ADARP55265 1226 aaKnown RBP9.6□□□□□ -0.87
RAE1-202ENST00000395840 NKX3-2P78367 333 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 KCNMA1Q12791 1236 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 UBE2SQ16763 222 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 PTPROQ16827 1216 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 MIIPQ5JXC2 388 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 C6orf118Q5T5N4 469 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 KLC3Q6P597 504 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 LRRC74BQ6ZQY2 392 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 RNF180Q86T96 592 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 NEK9Q8TD19 979 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 EPS8L3Q8TE67 593 aaKnown RBP9.6□□□□□ -0.87
RAE1-202ENST00000395840 ERP27Q96DN0 273 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 CNOT6LQ96LI5 555 aaKnown RBP9.6□□□□□ -0.87
RAE1-202ENST00000395840 NR1H4Q96RI1 486 aaPredicted RBP9.6□□□□□ -0.87
RAE1-202ENST00000395840 ERGIC2Q96RQ1 377 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 KATNBL1Q9H079 304 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 CRISPLD2Q9H0B8 497 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 DBR1Q9UK59 544 aaKnown RBP9.6□□□□□ -0.87
RAE1-202ENST00000395840 ZNF711Q9Y462 761 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 SMCHD1A6NHR9 2005 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 ASTN1O14525 1302 aa9.6□□□□□ -0.87
RAE1-202ENST00000395840 LCTP09848 1927 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 KRIT1O00522 736 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 ITGA4P13612 1032 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 CD97P48960 835 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 CDK7P50613 346 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 PMS2P54278 862 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 GSTM4Q03013 218 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 ORC2Q13416 577 aaPredicted RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 GIT2Q14161 759 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 SLC29A2Q14542 456 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 RPS6KA1Q15418 735 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 NAB2Q15742 525 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 GSTA3Q16772 222 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.59□□□□□ -0.87
RAE1-202ENST00000395840 DUSP28Q4G0W2 176 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 TDRD12Q587J7 1177 aaKnown RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 CFAP157Q5JU67 520 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 CGB2Q6NT52 195 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 TAPT1Q6NXT6 567 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 ZNF449Q6P9G9 518 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 PPFIBP2Q8ND30 876 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 CTNNBL1Q8WYA6 563 aaPredicted RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 INPP5DQ92835 1189 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 NMD3Q96D46 503 aaKnown RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 SENP7Q9BQF6 1050 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 SIKE1Q9BRV8 207 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 TSEN34Q9BSV6 310 aaKnown RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 SEZ6LQ9BYH1 1024 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 WDR11Q9BZH6 1224 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 PABPC3Q9H361 631 aaKnown RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 OGDHLQ9ULD0 1010 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 R3HDM2Q9Y2K5 976 aaKnown RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 UTP11Q9Y3A2 253 aaKnown RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 BOLA2-SMG1P6H3BVE0 249 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 CAPN9O14815 690 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 PSMA7O14818 248 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 PYGMP11217 842 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 CCND3P30281 292 aaPredicted RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 CA8P35219 290 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 CPT1AP50416 773 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 GALK1P51570 392 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 ARHGAP4P98171 946 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 LMNB2Q03252 620 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 LAMC2Q13753 1193 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 ASTE1Q2TB18 679 aaPredicted RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 WDR72Q3MJ13 1102 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 SPDYCQ5MJ68 293 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 TTI2Q6NXR4 508 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 RFWD3Q6PCD5 774 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 MARK2Q7KZI7 788 aaKnown RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 TAOK1Q7L7X3 1001 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 HS2ST1Q7LGA3 356 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 NANOGNBQ7Z5D8 188 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 PCSK9Q8NBP7 692 aaKnown RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 GDAP1Q8TB36 358 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 EMID1Q96A84 441 aaPredicted RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 SLC7A6OSQ96CW6 309 aaPredicted RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 OLFM3Q96PB7 478 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 DEFB118Q96PH6 123 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 TRIM51Q9BSJ1 452 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 MMRN2Q9H8L6 949 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 PFDN4Q9NQP4 134 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 EFR3BQ9Y2G0 817 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 NOC2LQ9Y3T9 749 aaKnown RBP9.59□□□□□ -0.87
RAE1-202ENST00000395840 LRRC37A2A6NM11 1700 aa9.59□□□□□ -0.87
RAE1-202ENST00000395840 SPATA31C2B4DYI2 1134 aa9.58□□□□□ -0.88
RAE1-202ENST00000395840 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.58□□□□□ -0.88
RAE1-202ENST00000395840 M0R2N6 131 aa9.58□□□□□ -0.88
RAE1-202ENST00000395840 LSM1O15116 133 aaKnown RBP9.58□□□□□ -0.88
RAE1-202ENST00000395840 MAP3K7O43318 606 aa9.58□□□□□ -0.88
RAE1-202ENST00000395840 KRT36O76013 467 aa9.58□□□□□ -0.88
RAE1-202ENST00000395840 GH1P01241 217 aa9.58□□□□□ -0.88
RAE1-202ENST00000395840 TXNP10599 105 aaKnown RBP9.58□□□□□ -0.88
RAE1-202ENST00000395840 IDO1P14902 403 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms