RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 NAA30Q147X3 362 aaPredicted RBP20.62■□□□□ 0.89
LMNB1-202ENST00000395354 ERCC6LQ2NKX8 1250 aa20.62■□□□□ 0.89
LMNB1-202ENST00000395354 TMEM240Q5SV17 173 aa20.62■□□□□ 0.89
LMNB1-202ENST00000395354 PSRC1Q6PGN9 363 aaPredicted RBP20.62■□□□□ 0.89
LMNB1-202ENST00000395354 MRPL10Q7Z7H8 261 aaKnown RBP20.62■□□□□ 0.89
LMNB1-202ENST00000395354 CTAGE6Q86UF2 777 aa20.62■□□□□ 0.89
LMNB1-202ENST00000395354 SLC47A2Q86VL8 602 aa20.62■□□□□ 0.89
LMNB1-202ENST00000395354 ECHDC2Q86YB7 292 aa20.62■□□□□ 0.89
LMNB1-202ENST00000395354 CTAGE4Q8IX94 777 aa20.62■□□□□ 0.89
LMNB1-202ENST00000395354 RFFLQ8WZ73 363 aa20.62■□□□□ 0.89
LMNB1-202ENST00000395354 RABGGTAQ92696 567 aa20.62■□□□□ 0.89
LMNB1-202ENST00000395354 TAF4BQ92750 862 aa20.62■□□□□ 0.89
LMNB1-202ENST00000395354 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.62■□□□□ 0.89
LMNB1-202ENST00000395354 NXF3Q9H4D5 531 aaKnown RBP20.62■□□□□ 0.89
LMNB1-202ENST00000395354 APOBEC3GQ9HC16 384 aaKnown RBP20.62■□□□□ 0.89
LMNB1-202ENST00000395354 SEPT11Q9NVA2 429 aaKnown RBP20.62■□□□□ 0.89
LMNB1-202ENST00000395354 GRID2IPA4D2P6 1211 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 EFCAB14O75071 495 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 BAIAP3O94812 1187 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 TMEM191BP0C7N4 346 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 KRT5P13647 590 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 ACO1P21399 889 aaKnown RBP20.61■□□□□ 0.89
LMNB1-202ENST00000395354 GRM5P41594 1212 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 MAGEA10P43363 369 aaPredicted RBP20.61■□□□□ 0.89
LMNB1-202ENST00000395354 ELF2Q15723 593 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.61■□□□□ 0.896e-6■□□□□ 8.1
LMNB1-202ENST00000395354 TMEM192Q8IY95 271 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 RNF169Q8NCN4 708 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 DDX1Q92499 740 aaKnown RBP20.61■□□□□ 0.89
LMNB1-202ENST00000395354 FAM212AQ96EL1 285 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 FAM84AQ96KN4 292 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 CCDC94Q9BW85 323 aaPredicted RBP20.61■□□□□ 0.89
LMNB1-202ENST00000395354 APOL6Q9BWW8 343 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 MTMR12Q9C0I1 747 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 RNF39Q9H2S5 420 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 SNTG2Q9NY99 539 aa20.61■□□□□ 0.89
LMNB1-202ENST00000395354 H0YGN5 161 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 EOMESO95936 686 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 ITGA4P13612 1032 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 NOP2P46087 812 aaKnown RBP20.6■□□□□ 0.89
LMNB1-202ENST00000395354 HADHBP55084 474 aaKnown RBP20.6■□□□□ 0.89
LMNB1-202ENST00000395354 FMO1Q01740 532 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 TRPC3Q13507 836 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 MEI1Q5TIA1 1274 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 CD302Q8IX05 232 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 RHOT2Q8IXI1 618 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 HACE1Q8IYU2 909 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 SYCE1Q8N0S2 351 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 GPR161Q8N6U8 529 aaKnown RBP20.6■□□□□ 0.89
LMNB1-202ENST00000395354 TPCN2Q8NHX9 752 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 UBE2Q2Q8WVN8 375 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 PGBD4Q96DM1 585 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 ACAP3Q96P50 834 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 TLR10Q9BXR5 811 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 RNF14Q9UBS8 474 aa20.6■□□□□ 0.89
LMNB1-202ENST00000395354 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.6■□□□□ 0.89
LMNB1-202ENST00000395354 V9GYY5 206 aaPredicted RBP20.6■□□□□ 0.89
LMNB1-202ENST00000395354 CXCL8P10145 99 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 AKAP5P24588 427 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 TFAMQ00059 246 aaKnown RBP20.59■□□□□ 0.89
LMNB1-202ENST00000395354 MTERF4Q7Z6M4 381 aaKnown RBP20.59■□□□□ 0.89
LMNB1-202ENST00000395354 SLFN11Q7Z7L1 901 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 ZNF598Q86UK7 904 aaKnown RBP20.59■□□□□ 0.89
LMNB1-202ENST00000395354 NT5DC4Q86YG4 428 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 EFCAB13Q8IY85 973 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 LRRC57Q8N9N7 239 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 OSBPL9Q96SU4 736 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 PCDHB18PQ96TA0 734 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 PARP2Q9UGN5 583 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 PUF60Q9UHX1 559 aaKnown RBP20.59■□□□□ 0.89
LMNB1-202ENST00000395354 NUB1Q9Y5A7 615 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 PCDHB7Q9Y5E2 793 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 TTC3P53804 2025 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 MICAL3Q7RTP6 2002 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 ZBBXA8MT70 800 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 CST3P01034 146 aaPredicted RBP20.59■□□□□ 0.89
LMNB1-202ENST00000395354 FTLP02792 175 aaPredicted RBP20.59■□□□□ 0.89
LMNB1-202ENST00000395354 AMHP03971 560 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 MMEP08473 750 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 ATF7P17544 494 aaPredicted RBP20.59■□□□□ 0.89
LMNB1-202ENST00000395354 SPOPLQ6IQ16 392 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 ZNF572Q7Z3I7 529 aaPredicted RBP20.59■□□□□ 0.89
LMNB1-202ENST00000395354 PALB2Q86YC2 1186 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 UBR7Q8N806 425 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 LPPQ93052 612 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 ARID3AQ99856 593 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 NIF3L1Q9GZT8 377 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 ELAC1Q9H777 363 aaKnown RBP20.59■□□□□ 0.89
LMNB1-202ENST00000395354 RNF216Q9NWF9 866 aaPredicted RBP20.59■□□□□ 0.89
LMNB1-202ENST00000395354 TMEM161AQ9NX61 479 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 TAS2R14Q9NYV8 317 aa20.59■□□□□ 0.89
LMNB1-202ENST00000395354 MEIS3P2A8K0S8 358 aa20.58■□□□□ 0.88
LMNB1-202ENST00000395354 LACTBL1A8MY62 500 aa20.58■□□□□ 0.88
LMNB1-202ENST00000395354 TMCO5BA8MYB1 307 aa20.58■□□□□ 0.88
LMNB1-202ENST00000395354 CES2O00748 559 aa20.58■□□□□ 0.88
LMNB1-202ENST00000395354 YARSP54577 528 aaKnown RBP20.58■□□□□ 0.88
LMNB1-202ENST00000395354 MYL6P60660 151 aa20.58■□□□□ 0.88
LMNB1-202ENST00000395354 WDR5P61964 334 aaKnown RBP20.58■□□□□ 0.88
LMNB1-202ENST00000395354 GPC5P78333 572 aa20.58■□□□□ 0.88
LMNB1-202ENST00000395354 ITIH3Q06033 890 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms