RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 METTL5Q9NRN9 209 aaKnown RBP16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 NFASCO94856 1347 aa16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 TARSL2A2RTX5 802 aaKnown RBP16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 MIF4GDA9UHW6 222 aaKnown RBP16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 ACAT1P24752 427 aaKnown RBP16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 KIF22Q14807 665 aa16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 CXCL17Q6UXB2 119 aa16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 ACO2Q99798 780 aaKnown RBP16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 ARF4P18085 180 aaPredicted RBP16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 ARPP19P56211 112 aa16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 MYO1EQ12965 1108 aa16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 ZKSCAN8Q15776 578 aaPredicted RBP16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 ILDR2Q71H61 639 aa16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 PAF1Q8N7H5 531 aa16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 RPS6KC1Q96S38 1066 aa16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 TINF2Q9BSI4 451 aa16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 GCOM2Q9BZD3 368 aaPredicted RBP16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 RARAP10276 462 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 SEC24CP53992 1094 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 CLEC16AQ2KHT3 1053 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 SNX25Q9H3E2 840 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 ACKR2O00590 384 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 CAPN9O14815 690 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 KRT15P19012 456 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 SLC13A5Q86YT5 568 aaPredicted RBP16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 LMO3Q8TAP4 145 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 MFSD14AQ96MC6 490 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 SGIP1Q9BQI5 828 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 SPC25Q9HBM1 224 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 GRIN3BO60391 1043 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 LCA5LO95447 670 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 ZSCAN5DPP0CG00 497 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 NR1D1P20393 614 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 CASC4Q6P4E1 433 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 MDM1Q8TC05 714 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 HVCN1Q96D96 273 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 OSBPL8Q9BZF1 889 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 GPR88Q9GZN0 384 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 WNT8AQ9H1J5 351 aa16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 PRMT7Q9NVM4 692 aaPredicted RBP16.84■□□□□ 0.29
SMARCD1-202ENST00000394963 ARL2P36404 184 aa16.83■□□□□ 0.29
SMARCD1-202ENST00000394963 RABGGTBP53611 331 aa16.83■□□□□ 0.29
SMARCD1-202ENST00000394963 HADHQ16836 314 aaKnown RBP16.83■□□□□ 0.29
SMARCD1-202ENST00000394963 CTAGE3PQ8IX95 158 aa16.83■□□□□ 0.29
SMARCD1-202ENST00000394963 FAM114A2Q9NRY5 505 aa16.83■□□□□ 0.29
SMARCD1-202ENST00000394963 PARVAQ9NVD7 372 aa16.83■□□□□ 0.29
SMARCD1-202ENST00000394963 LTBP3Q9NS15 1303 aa16.83■□□□□ 0.29
SMARCD1-202ENST00000394963 EBAG9O00559 213 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 VNN1O95497 513 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 PRLRP16471 622 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 HSD17B3P37058 310 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 GPS1Q13098 491 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 KYNUQ16719 465 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 ENOSF1Q7L5Y1 443 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 ANKMY2Q8IV38 441 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 BRSK2Q8IWQ3 736 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 RHOT1Q8IXI2 618 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 NEUROG2Q9H2A3 272 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 DPP3Q9NY33 737 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 MYBPC2Q14324 1141 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 SLC29A2Q14542 456 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 LONRF1Q17RB8 773 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 FAXCQ5TGI0 409 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 DENND1BQ6P3S1 775 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 TLK2Q86UE8 772 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 ABRAQ8N0Z2 381 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 LRRC57Q8N9N7 239 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 GDAP1Q8TB36 358 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 HNRNPLLQ8WVV9 542 aaKnown RBP16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 CARD9Q9H257 536 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 CALCOCO1Q9P1Z2 691 aa16.83■□□□□ 0.28
SMARCD1-202ENST00000394963 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 NEBLO76041 1014 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 PDGFRAP16234 1089 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 YWHAEP62258 255 aaKnown RBP16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 BBS9Q3SYG4 887 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 GLE1Q53GS7 698 aaKnown RBP16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 FOXR1Q6PIV2 292 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 NME8Q8N427 588 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 WHAMMQ8TF30 809 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 C18orf25Q96B23 403 aaPredicted RBP16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 C4BPAP04003 597 aaKnown RBP16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 SMPD1P17405 629 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 SCUBE3Q8IX30 993 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 EFCAB13Q8IY85 973 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 ERP44Q9BS26 406 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 UVRAGQ9P2Y5 699 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 FOXO6A8MYZ6 492 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 HCRTO43612 131 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 ETS1P14921 441 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 TCF4P15884 667 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 GCLCP48506 637 aaPredicted RBP16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 CDH6P55285 790 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 NME3Q13232 169 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 SH3D19Q5HYK7 790 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 FEZF2Q8TBJ5 459 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 SEMA4AQ9H3S1 761 aa16.82■□□□□ 0.28
SMARCD1-202ENST00000394963 NDST1P52848 882 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 TAS2R40P59535 323 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 NOL9Q5SY16 702 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms