RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 ELF1P32519 619 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 PPP3CCP48454 512 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 EPHB3P54753 998 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 USP4Q13107 963 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 CCINQ13939 588 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 POSTNQ15063 836 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 LONRF3Q496Y0 759 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 C9orf57Q5W0N0 161 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 KCNK18Q7Z418 384 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 CAMKK1Q8N5S9 505 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 CCDC26Q8TAB7 109 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 RAD54LQ92698 747 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 RMDN1Q96DB5 314 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 FUBP3Q96I24 572 aaKnown RBP eCLIP6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 RPP25Q9BUL9 199 aaKnown RBP6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 TASP1Q9H6P5 420 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 E9PMD0 336 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 CLDN3O15551 220 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 CSPG5O95196 566 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 HAPLN1P10915 354 aaPredicted RBP6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 CCR2P41597 374 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 DPP6P42658 865 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 BRCC3P46736 316 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 RAP1GAPP47736 663 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 YWHAHQ04917 246 aaPredicted RBP6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 ENOX2Q16206 610 aaKnown RBP6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 IQCEQ6IPM2 695 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 SLC39A4Q6P5W5 647 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 TRMT1LQ7Z2T5 733 aaKnown RBP6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 CCDC83Q8IWF9 413 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 SPATA17Q96L03 361 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 HCFC1R1Q9NWW0 138 aa6.77□□□□□ -1.33
SMARCAD1-203ENST00000394961 CEP192Q8TEP8 1941 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 A0A0A0MRY4 1105 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 LDHAP00338 332 aaKnown RBP6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 NTHL1P78549 312 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 ARHGAP15Q53QZ3 475 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 PLA2G2CQ5R387 149 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 RNF19BQ6ZMZ0 732 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 HAUS6Q7Z4H7 955 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 LARP6Q9BRS8 491 aaKnown RBP6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 SPATA6Q9NWH7 488 aaPredicted RBP6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 CGNQ9P2M7 1197 aaKnown RBP6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 UXTQ9UBK9 157 aaPredicted RBP6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 EBF1Q9UH73 591 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 GDAQ9Y2T3 454 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 UPK3BL1B0FP48 263 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 UPK3BL2E5RIL1 263 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 ZNF263O14978 683 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 LILRA4P59901 499 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 TWF1Q12792 350 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 PDGFRLQ15198 375 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 FBXO43Q4G163 708 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 TMEM196Q5HYL7 178 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 L1TD1Q5T7N2 865 aaKnown RBP6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 PEAR1Q5VY43 1037 aaPredicted RBP6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 TOP6BLQ8N6T0 577 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 FAM184AQ8NB25 1140 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 FAM3CQ92520 227 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 ZNF560Q96MR9 790 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 FOXQ1Q9C009 403 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 CUEDC2Q9H467 287 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 PARVGQ9HBI0 331 aa6.76□□□□□ -1.33
SMARCAD1-203ENST00000394961 GABRDO14764 452 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 ATG13O75143 517 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 EIF2DP41214 584 aaKnown RBP6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 SURF1Q15526 300 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 SV2CQ496J9 727 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 KCNV2Q8TDN2 545 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 OVCA2Q8WZ82 227 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 KXD1Q9BQD3 176 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 FAM83CQ9BQN1 747 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 TTLL2Q9BWV7 592 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 MAGEF1Q9HAY2 307 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 BMP2KQ9NSY1 1161 aaPredicted RBP6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 TUBGCP4Q9UGJ1 667 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 ITGA11Q9UKX5 1188 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 MUC6Q6W4X9 2439 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 LACTBL1A8MY62 500 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 PRRG1O14668 218 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 TM4SF5O14894 197 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 F11P03951 625 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 IBSPP21815 317 aaPredicted RBP6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 MCM4P33991 863 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 CACNB1Q02641 598 aaPredicted RBP6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 KARSQ15046 597 aaKnown RBP6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 CFAP221Q4G0U5 840 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 WDR44Q5JSH3 913 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 SPDYCQ5MJ68 293 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 DGLUCYQ7Z3D6 616 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 C12orf56Q8IXR9 622 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 DCP1BQ8IZD4 617 aaKnown RBP6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 CEP120Q8N960 986 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 C18orf25Q96B23 403 aaPredicted RBP6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 ACBD6Q9BR61 282 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 KIFC3Q9BVG8 833 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 RPF1Q9H9Y2 349 aaKnown RBP6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 MTF2Q9Y483 593 aaPredicted RBP6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 HEPACAM2A8MVW5 462 aa6.75□□□□□ -1.33
SMARCAD1-203ENST00000394961 SLC16A4O15374 487 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms