RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 CACUL1Q86Y37 369 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 RNPC3Q96LT9 517 aaKnown RBP12.8□□□□□ -0.36
SIN3A-202ENST00000394947 CD248Q9HCU0 757 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 PSD3Q9NYI0 1048 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 SLAIN2Q9P270 581 aa12.8□□□□□ -0.36
SIN3A-202ENST00000394947 LIMA1Q9UHB6 759 aaKnown RBP12.8□□□□□ -0.36
SIN3A-202ENST00000394947 HERC5Q9UII4 1024 aaKnown RBP12.8□□□□□ -0.36
SIN3A-202ENST00000394947 UTYO14607 1347 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 B2RBV5 119 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 GLRBP48167 497 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 C16orf89Q6UX73 402 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 TBC1D10CQ8IV04 446 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 PCDHGA4Q9Y5G9 962 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 TRIM16LQ309B1 348 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 PAN2Q504Q3 1202 aaKnown RBP12.79□□□□□ -0.36
SIN3A-202ENST00000394947 PRAMEF18Q5VWM3 479 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 FRMD6Q96NE9 622 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 OLFM1Q99784 485 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 CELF4Q9BZC1 486 aaKnown RBP12.79□□□□□ -0.36
SIN3A-202ENST00000394947 LGALS16A8MUM7 142 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 OTUD4Q01804 1114 aaKnown RBP12.79□□□□□ -0.36
SIN3A-202ENST00000394947 CCDC144BQ3MJ40 725 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 SAPCD2Q86UD0 394 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 MDM1Q8TC05 714 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 CEP95Q96GE4 821 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 DDX50Q9BQ39 737 aaKnown RBP12.79□□□□□ -0.36
SIN3A-202ENST00000394947 TSEN34Q9BSV6 310 aaKnown RBP12.79□□□□□ -0.36
SIN3A-202ENST00000394947 FAM96AQ9H5X1 160 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 COPRSQ9NQ92 184 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 CYP27B1O15528 508 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 SH3BGRLO75368 114 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 ITGB6P18564 788 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 GPC1P35052 558 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 CAV1Q03135 178 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 ELP3Q9H9T3 547 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 C16orf96A6NNT2 1141 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 ZNF682O95780 498 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 GOLPH3Q9H4A6 298 aa12.79□□□□□ -0.36
SIN3A-202ENST00000394947 ECE2O60344 883 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 CYP51A1Q16850 503 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 DCAF6Q58WW2 860 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 C3orf62Q6ZUJ4 267 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 NLGN1Q8N2Q7 840 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 GFM2Q969S9 779 aaKnown RBP12.78□□□□□ -0.36
SIN3A-202ENST00000394947 AGPAT1Q99943 283 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 SPATA16Q9BXB7 569 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 WWOXQ9NZC7 414 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 COL17A1Q9UMD9 1497 aaPredicted RBP12.78□□□□□ -0.36
SIN3A-202ENST00000394947 WEE2P0C1S8 567 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 CDH2P19022 906 aaPredicted RBP12.78□□□□□ -0.36
SIN3A-202ENST00000394947 ATP6V1B2P21281 511 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 POU4F1Q01851 419 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 TP53BP2Q13625 1128 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 B3GALNT2Q8NCR0 500 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 IRX2Q9BZI1 471 aaPredicted RBP12.78□□□□□ -0.36
SIN3A-202ENST00000394947 RPS6KB2Q9UBS0 482 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 ZBTB5O15062 677 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 ALBP02768 609 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 CENPLQ8N0S6 344 aaPredicted RBP12.78□□□□□ -0.36
SIN3A-202ENST00000394947 UBASH3BQ8TF42 649 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 SEMA4DQ92854 862 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 FAM129AQ9BZQ8 928 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 ATP10DQ9P241 1426 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 A0A087X0T9 212 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 ALDH1A2O94788 518 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 ZNF23P17027 643 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 TBXAS1P24557 533 aaPredicted RBP12.78□□□□□ -0.36
SIN3A-202ENST00000394947 ALDH9A1P49189 494 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 NR1H3Q13133 447 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 ANKS6Q68DC2 871 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 METTL5Q9NRN9 209 aaKnown RBP12.78□□□□□ -0.36
SIN3A-202ENST00000394947 KLK14Q9P0G3 267 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 HOXB7P09629 217 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 PRDX5P30044 214 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 DSG3P32926 999 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 ABCD1P33897 745 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 ATP1A4Q13733 1029 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 SUSD4Q5VX71 490 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 TMC5Q6UXY8 1006 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 POMGNT2Q8NAT1 580 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 BLOC1S5Q8TDH9 187 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 PMM1Q92871 262 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 NEU2Q9Y3R4 380 aa12.78□□□□□ -0.36
SIN3A-202ENST00000394947 TTC26A0AVF1 554 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 CLASP2O75122 1294 aaKnown RBP12.77□□□□□ -0.36
SIN3A-202ENST00000394947 KCNJ6P48051 423 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 ZNF200P98182 395 aaPredicted RBP12.77□□□□□ -0.36
SIN3A-202ENST00000394947 PPP1R18Q6NYC8 613 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 IZUMO1Q8IYV9 350 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 TRPC4APQ8TEL6 797 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 GID8Q9NWU2 228 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 PADI4Q9UM07 663 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 PMPCBO75439 489 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 ITGA3P26006 1051 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 GUCY1A2P33402 732 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 MCAMP43121 646 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 ST13P50502 369 aaKnown RBP12.77□□□□□ -0.36
SIN3A-202ENST00000394947 ALCAMQ13740 583 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 SEZ6Q53EL9 994 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms