RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 HLA-DRAP01903 254 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 ITGAVP06756 1048 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 PSAPP07602 524 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 CA4P22748 312 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 CCND2P30279 289 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 MRPS9P82933 396 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 CUL2Q13617 745 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 MPP2Q14168 576 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 PIGHQ14442 188 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 PGM5Q15124 567 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 KCTD19Q17RG1 926 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 TSNAXIP1Q2TAA8 658 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 WDR78Q5VTH9 848 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 CYP4F22Q6NT55 531 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 BZW1Q7L1Q6 419 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 CYP4X1Q8N118 509 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 KIF2BQ8N4N8 673 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 SYTL5Q8TDW5 730 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 DENND1AQ8TEH3 1009 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 ERP27Q96DN0 273 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 CEP170P1Q96L14 293 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 FAM213AQ9BRX8 229 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 HEMGNQ9BXL5 484 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 ZNF518BQ9C0D4 1074 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 MAF1Q9H063 256 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 MYLK2Q9H1R3 596 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 VPS37BQ9H9H4 285 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 RNPEPL1Q9HAU8 725 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 MLXIPLQ9NP71 852 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 GPRC5CQ9NQ84 441 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 DNAJC17Q9NVM6 304 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 SLC5A4Q9NY91 659 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 ZNF70Q9UC06 446 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 GGT7Q9UJ14 662 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 PNMA3Q9UL41 463 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 CNTN6Q9UQ52 1028 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 R3HDM2Q9Y2K5 976 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 KRT1P04264 644 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 CALB2P22676 271 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 ARSEP51690 589 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 VCPP55072 806 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 WDR4P57081 412 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 GEMIN4P57678 1058 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 IRX1P78414 480 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 SF3A3Q12874 501 aaKnown RBP eCLIP10.61□□□□□ -0.712e-8■□□□□ 10.5
UBE2D3-208ENST00000394803 MOGSQ13724 837 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 TAF11Q15544 211 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 ANKRD20A2Q5SQ80 823 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 ANKRD20A1Q5TYW2 823 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 ANKRD20A3Q5VUR7 823 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 CGB2Q6NT52 195 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 MIS18BP1Q6P0N0 1132 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 PAXIP1Q6ZW49 1069 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 ATP11CQ8NB49 1132 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 ZSWIM2Q8NEG5 633 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 NKD2Q969F2 451 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 AGBL1Q96MI9 1066 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 C11orf70Q9BRQ4 267 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 TOPORSQ9NS56 1045 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 LNPEPQ9UIQ6 1025 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 CORO1CQ9ULV4 474 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 PCDHB4Q9Y5E5 795 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 C2CD2LO14523 706 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 FOXN2P32314 431 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 MKRN4PQ13434 485 aaPredicted RBP10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 ZYXQ15942 572 aaKnown RBP10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 UGCGQ16739 394 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 SPDYE2Q495Y8 402 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 TFDP3Q5H9I0 405 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 ARHGEF16Q5VV41 709 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 SAMD1Q6SPF0 538 aaPredicted RBP10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 FAM47EQ6ZV65 393 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 STK32AQ8WU08 396 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 SLITRK1Q96PX8 696 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.6□□□□□ -0.711e-7■■■■■ 61.1
UBE2D3-208ENST00000394803 CYP39A1Q9NYL5 469 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 COL20A1Q9P218 1284 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 ANKFY1Q9P2R3 1169 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 USTQ9Y2C2 406 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 ARID2Q68CP9 1835 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 POC1B-GALNT4F8VUJ3 575 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 NFIBO00712 420 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 KIF3CO14782 793 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 STAM2O75886 525 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 MMP10P09238 476 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 CETPP11597 493 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 MYCLP12524 364 aaPredicted RBP10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 PTPN4P29074 926 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 ARL4CP56559 192 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 TAS2R40P59535 323 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 GPS1Q13098 491 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 DNAJC3Q13217 504 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 HIF1AQ16665 826 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 EFHC2Q5JST6 749 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 PLA2G4FQ68DD2 849 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 SLC39A4Q6P5W5 647 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 RSBN1LQ6PCB5 846 aaPredicted RBP10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 POLNQ7Z5Q5 900 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 ERICH1Q86X53 443 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 ARHGAP24Q8N264 748 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms