RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 RIN2Q8WYP3 895 aaPredicted RBP21.66■■□□□ 1.06
PRKCD-202ENST00000394729 HEMGNQ9BXL5 484 aa21.66■■□□□ 1.06
PRKCD-202ENST00000394729 FAM49BQ9NUQ9 324 aa21.66■■□□□ 1.06
PRKCD-202ENST00000394729 GTF3C4Q9UKN8 822 aa21.66■■□□□ 1.06
PRKCD-202ENST00000394729 AFF1P51825 1210 aaKnown RBP21.66■■□□□ 1.06
PRKCD-202ENST00000394729 SOCS4Q8WXH5 440 aa21.66■■□□□ 1.06
PRKCD-202ENST00000394729 HEXIM2Q96MH2 286 aaKnown RBP21.66■■□□□ 1.06
PRKCD-202ENST00000394729 DPH5Q9H2P9 285 aa21.66■■□□□ 1.06
PRKCD-202ENST00000394729 MROH7Q68CQ1 1323 aa21.66■■□□□ 1.06
PRKCD-202ENST00000394729 RRN3P2A6NIE6 340 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 ERLIN1O75477 346 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 PRKAR2AP13861 404 aaKnown RBP21.65■■□□□ 1.06
PRKCD-202ENST00000394729 CACNB2Q08289 660 aaPredicted RBP21.65■■□□□ 1.06
PRKCD-202ENST00000394729 HLTFQ14527 1009 aaKnown RBP eCLIP21.65■■□□□ 1.06
PRKCD-202ENST00000394729 ATP13A4Q4VNC1 1196 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 DENND1BQ6P3S1 775 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 PTPN22Q9Y2R2 807 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 SART1O43290 800 aaKnown RBP21.65■■□□□ 1.06
PRKCD-202ENST00000394729 DARSP14868 501 aaKnown RBP21.65■■□□□ 1.06
PRKCD-202ENST00000394729 SND1Q7KZF4 910 aaKnown RBP eCLIP21.65■■□□□ 1.06
PRKCD-202ENST00000394729 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.65■■□□□ 1.06
PRKCD-202ENST00000394729 STIM2Q9P246 746 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 RAB21Q9UL25 225 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 MYO1FO00160 1098 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 PLA2G4AP47712 749 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 INHBEP58166 350 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 BRD3Q15059 726 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 MCEEQ96PE7 176 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 TRIM51Q9BSJ1 452 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 SYNCQ9H7C4 482 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 PCDH10Q9P2E7 1040 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 SCN1AP35498 2009 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 COL1A2P08123 1366 aa21.65■■□□□ 1.06
PRKCD-202ENST00000394729 TTI1O43156 1089 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 BPIFB4P59827 614 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 SNX1Q13596 522 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 CCDC142Q17RM4 750 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 GDF6Q6KF10 455 aaPredicted RBP21.64■■□□□ 1.05
PRKCD-202ENST00000394729 CCDC50Q8IVM0 306 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 LPPQ93052 612 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 PI4K2BG5E9Z4 385 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 TLR3O15455 904 aaKnown RBP21.64■■□□□ 1.05
PRKCD-202ENST00000394729 GRAP2O75791 330 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 PDGFRBP09619 1106 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 HOXD8P13378 290 aaPredicted RBP21.64■■□□□ 1.05
PRKCD-202ENST00000394729 KCNJ1P48048 391 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 CASP8Q14790 479 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 SLC27A1Q6PCB7 646 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 EMC1Q8N766 993 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 RPGRIP1Q96KN7 1286 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 NFKBIZQ9BYH8 718 aa21.64■■□□□ 1.05
PRKCD-202ENST00000394729 SIP14410 1827 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 FAM153BP0C7A2 387 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 FAM153CQ494X1 144 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 CAPNS2Q96L46 248 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 ELOVL4Q9GZR5 314 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 FAM153AQ9UHL3 310 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 IL18RAPO95256 599 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 CYP1A2P05177 515 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 ZNF618Q5T7W0 954 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 MFSD14CQ5VZR4 134 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 NOTUMQ6P988 496 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 MON1BQ7L1V2 547 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 MMGT1Q8N4V1 131 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 CD99L2Q8TCZ2 262 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 XPNPEP3Q9NQH7 507 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 CYTH4Q9UIA0 394 aa21.63■■□□□ 1.05
PRKCD-202ENST00000394729 ASGR1P07306 291 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 RARBP10826 455 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 RGS7P49802 495 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 TNNC1P63316 161 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 SURF1Q15526 300 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 SMC1BQ8NDV3 1235 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 C18orf8Q96DM3 657 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 CITO14578 2027 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 CYP1A1P04798 512 aaPredicted RBP21.62■■□□□ 1.05
PRKCD-202ENST00000394729 NDST1P52848 882 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 YARSP54577 528 aaKnown RBP21.62■■□□□ 1.05
PRKCD-202ENST00000394729 CENPCQ03188 943 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 FAM187BQ17R55 369 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 DCUN1D2Q6PH85 259 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 CCNI2Q6ZMN8 369 aaPredicted RBP21.62■■□□□ 1.05
PRKCD-202ENST00000394729 ZNF410Q86VK4 478 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 WDTC1Q8N5D0 677 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 ARRDC4Q8NCT1 418 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 PBKQ96KB5 322 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 L1RE1Q9UN81 338 aa21.62■■□□□ 1.05
PRKCD-202ENST00000394729 MAMLD1Q13495 774 aa21.61■■□□□ 1.05
PRKCD-202ENST00000394729 KAZNQ674X7 775 aa21.61■■□□□ 1.05
PRKCD-202ENST00000394729 ACOT1Q86TX2 421 aa21.61■■□□□ 1.05
PRKCD-202ENST00000394729 ZDHHC14Q8IZN3 488 aa21.61■■□□□ 1.05
PRKCD-202ENST00000394729 KRT222Q8N1A0 295 aa21.61■■□□□ 1.05
PRKCD-202ENST00000394729 MSL3Q8N5Y2 521 aaKnown RBP21.61■■□□□ 1.05
PRKCD-202ENST00000394729 UBL4BQ8N7F7 174 aa21.61■■□□□ 1.05
PRKCD-202ENST00000394729 ATG4AQ8WYN0 398 aa21.61■■□□□ 1.05
PRKCD-202ENST00000394729 SMIM35A0A1B0GVV1 85 aa21.61■■□□□ 1.05
PRKCD-202ENST00000394729 MBLAC1A4D2B0 266 aaPredicted RBP21.61■■□□□ 1.05
PRKCD-202ENST00000394729 M0QYV0 167 aa21.61■■□□□ 1.05
PRKCD-202ENST00000394729 AP3M2P53677 418 aa21.61■■□□□ 1.05
PRKCD-202ENST00000394729 RAD23BP54727 409 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms