RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PCDHGC3Q9UN70 934 aa15.95■□□□□ 0.14
CCT4-201ENST00000394440 PIN4Q9Y237 131 aaKnown RBP15.95■□□□□ 0.14
CCT4-201ENST00000394440 HTTP42858 3142 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 HSPA8P11142 646 aaKnown RBP15.94■□□□□ 0.14
CCT4-201ENST00000394440 ELNP15502 786 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 RRM1P23921 792 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 CDH5P33151 784 aaPredicted RBP15.94■□□□□ 0.14
CCT4-201ENST00000394440 MAP2K2P36507 400 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 RAP1GAPP47736 663 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 MAP3K21Q5TCX8 1036 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 CC2D1AQ6P1N0 951 aaPredicted RBP15.94■□□□□ 0.14
CCT4-201ENST00000394440 SESTD1Q86VW0 696 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 PASD1Q8IV76 773 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 WHAMMQ8TF30 809 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 TFAP2BQ92481 460 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 CD101Q93033 1021 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 CARD9Q9H257 536 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 PDCL3Q9H2J4 239 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 SMYD3Q9H7B4 428 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 CYP3A43Q9HB55 503 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 RNF216Q9NWF9 866 aaPredicted RBP15.94■□□□□ 0.14
CCT4-201ENST00000394440 SRRDQ9UH36 339 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 AGAP1Q9UPQ3 857 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 HES2Q9Y543 173 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 MIF4GDA9UHW6 222 aaKnown RBP15.94■□□□□ 0.14
CCT4-201ENST00000394440 BRD2P25440 801 aaKnown RBP15.94■□□□□ 0.14
CCT4-201ENST00000394440 RBP5P82980 135 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 ZNF394Q53GI3 561 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 FAM228AQ86W67 206 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 HNRNPLLQ8WVV9 542 aaKnown RBP15.94■□□□□ 0.14
CCT4-201ENST00000394440 HPDLQ96IR7 371 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 SELENOOQ9BVL4 669 aa15.94■□□□□ 0.14
CCT4-201ENST00000394440 FAM124BQ9H5Z6 455 aaPredicted RBP15.94■□□□□ 0.14
CCT4-201ENST00000394440 TTC7AQ9ULT0 858 aaPredicted RBP15.94■□□□□ 0.14
CCT4-201ENST00000394440 FRMPD3Q5JV73 1810 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 CILPO75339 1184 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 RECQL4O94761 1208 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 LSM8O95777 96 aaKnown RBP15.93■□□□□ 0.14
CCT4-201ENST00000394440 CDH8P55286 799 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 MRPS6P82932 125 aaKnown RBP15.93■□□□□ 0.14
CCT4-201ENST00000394440 C1QBPQ07021 282 aaKnown RBP15.93■□□□□ 0.14
CCT4-201ENST00000394440 XKR4Q5GH76 650 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 SERINC5Q86VE9 423 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 ALG3Q92685 438 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 WNT8BQ93098 351 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 CEP104O60308 925 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 ASGR1P07306 291 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 PAEPP09466 180 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 COMTP21964 271 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 MMP8P22894 467 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 SSTR3P32745 418 aaPredicted RBP15.93■□□□□ 0.14
CCT4-201ENST00000394440 YARSP54577 528 aaKnown RBP15.93■□□□□ 0.14
CCT4-201ENST00000394440 RAD23BP54727 409 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 MESDQ14696 234 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 TMCO3Q6UWJ1 677 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 RPAINQ86UA6 219 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 BTBD6Q96KE9 485 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.93■□□□□ 0.141e-8■□□□□ 10.5
CCT4-201ENST00000394440 C11orf70Q9BRQ4 267 aa15.93■□□□□ 0.14
CCT4-201ENST00000394440 NOC2LQ9Y3T9 749 aaKnown RBP15.93■□□□□ 0.14
CCT4-201ENST00000394440 PGRMC1O00264 195 aaKnown RBP15.92■□□□□ 0.14
CCT4-201ENST00000394440 INCA1Q0VD86 236 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 PLEKHA7Q6IQ23 1121 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 LLGL2Q6P1M3 1020 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 TWNKQ96RR1 684 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 LRRC1Q9BTT6 524 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 TRIM6Q9C030 488 aaPredicted RBP15.92■□□□□ 0.14
CCT4-201ENST00000394440 ZNF518BQ9C0D4 1074 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 ADAM22Q9P0K1 906 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 TRPV2Q9Y5S1 764 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 CDY2AQ9Y6F7 541 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 GRIN2DO15399 1336 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 HMGCRP04035 888 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 P4HA1P13674 534 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 PEX5P50542 639 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 C2CD6Q53TS8 623 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 CPNE8Q86YQ8 564 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 WDTC1Q8N5D0 677 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 SLC4A11Q8NBS3 891 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 CD99L2Q8TCZ2 262 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 RUBCNQ92622 972 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 KRT35Q92764 455 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 TUBGCP4Q9UGJ1 667 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 HMGXB4Q9UGU5 601 aa15.92■□□□□ 0.14
CCT4-201ENST00000394440 SEC31AO94979 1220 aaKnown RBP15.91■□□□□ 0.14
CCT4-201ENST00000394440 CTNNA2P26232 953 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 MGAT3Q09327 533 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 KCNA10Q16322 511 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 MMS22LQ6ZRQ5 1243 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 SMG8Q8ND04 991 aaKnown RBP15.91■□□□□ 0.14
CCT4-201ENST00000394440 ELOVL4Q9GZR5 314 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 WNT8AQ9H1J5 351 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 ANAPC7Q9UJX3 599 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 TCRBV5S1A1TA0A578 114 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 TMEM110-MUSTN1A8MSY1 372 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 TRPA1O75762 1119 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 CTNNA1P35221 906 aaKnown RBP15.91■□□□□ 0.14
CCT4-201ENST00000394440 MARCKSL1P49006 195 aa15.91■□□□□ 0.14
CCT4-201ENST00000394440 RNASE9P60153 205 aaKnown RBP15.91■□□□□ 0.14
CCT4-201ENST00000394440 GLE1Q53GS7 698 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms