RNA–Protein interactions for RNA: ENST00000394243.5

SYNPO-202, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 7,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-202ENST00000394243 SLC25A41Q8N5S1 370 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 PTPRN2Q92932 1015 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 APEX2Q9UBZ4 518 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 C2CD2Q9Y426 696 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 CFAP99D6REC4 459 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 NMT2O60551 498 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 KCNA6P17658 529 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 SLC34A1Q06495 639 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 Q4G0T1 1027 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 ARMC4Q5T2S8 1044 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 TNIP2Q8NFZ5 429 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 MCRS1Q96EZ8 462 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 ECSITQ9BQ95 431 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 WDR19Q8NEZ3 1342 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 STXBP2Q15833 593 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 LRRC74BQ6ZQY2 392 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 PRCCQ92733 491 aaPredicted RBP12.38□□□□□ -0.43
SYNPO-202ENST00000394243 HES6Q96HZ4 224 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 ALDH8A1Q9H2A2 487 aaPredicted RBP12.38□□□□□ -0.43
SYNPO-202ENST00000394243 IPPQ9Y573 584 aa12.38□□□□□ -0.43
SYNPO-202ENST00000394243 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.37□□□□□ -0.43
SYNPO-202ENST00000394243 SPRP35270 261 aaPredicted RBP12.37□□□□□ -0.43
SYNPO-202ENST00000394243 STX5Q13190 355 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 DCAF15Q66K64 600 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 BNC2Q6ZN30 1099 aaPredicted RBP12.37□□□□□ -0.43
SYNPO-202ENST00000394243 ZHX2Q9Y6X8 837 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 THRAP10827 490 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 ATP4AP20648 1035 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 PWP1Q13610 501 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 EFHC1Q5JVL4 640 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 WASHC2DQ5SRD0 308 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 SPDYE5A6NIY4 337 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 TRIM49D1C9J1S8 452 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 SPAG6O75602 509 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 SPDYE7PQ495Y7 208 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 CLVS1Q8IUQ0 354 aaPredicted RBP12.37□□□□□ -0.43
SYNPO-202ENST00000394243 CAPSLQ8WWF8 208 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 SPRTNQ9H040 489 aaPredicted RBP12.37□□□□□ -0.43
SYNPO-202ENST00000394243 ARHGEF38Q9NXL2 777 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 ALG6Q9Y672 507 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 PLEKHG2Q9H7P9 1386 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 CLRN2A0PK11 232 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 SNPHO15079 494 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 TSPAN9O75954 239 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 ZNF568Q3ZCX4 644 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 SLC10A5Q5PT55 438 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 FAM192AQ9GZU8 254 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 SIK2Q9H0K1 926 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 EPS8L2Q9H6S3 715 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 STK39Q9UEW8 545 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 TAGLN3Q9UI15 199 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 MAST1Q9Y2H9 1570 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 ZBTB49Q6ZSB9 765 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 TMEM120AQ9BXJ8 343 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 TRIM9Q9C026 710 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 SLC8A2Q9UPR5 921 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 SPATA31E1Q6ZUB1 1445 aa12.37□□□□□ -0.43
SYNPO-202ENST00000394243 SAC3D1A6NKF1 404 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 GUCA1CO95843 209 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 GUCY1A2P33402 732 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 JAK3P52333 1124 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 KCTD2Q14681 263 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 CCDC80Q76M96 950 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 CEP44Q9C0F1 390 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 EFCAB1Q9HAE3 211 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 TUBE1Q9UJT0 475 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 A0A1W2PQJ5 194 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 ZNF862O60290 1169 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 MCPH1Q8NEM0 835 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 TSPAN17Q96FV3 270 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 ZFRQ96KR1 1074 aaKnown RBP12.36□□□□□ -0.43
SYNPO-202ENST00000394243 ATMINO43313 823 aaPredicted RBP12.36□□□□□ -0.43
SYNPO-202ENST00000394243 PSMC6P62333 389 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 MAPK6Q16659 721 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 GDPD5Q8WTR4 605 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 ITGB1BP2Q9UKP3 347 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 CYP2D6P10635 497 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 TRMT5Q32P41 509 aaKnown RBP12.36□□□□□ -0.43
SYNPO-202ENST00000394243 C11orf74Q86VG3 221 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 MCEEQ96PE7 176 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 TMEM237Q96Q45 408 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 ANKZF1Q9H8Y5 726 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.36□□□□□ -0.43
SYNPO-202ENST00000394243 SUPT3HB4E1H0 165 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 GSTT1P30711 240 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 BFSP2Q13515 415 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 MTMR1Q13613 665 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 GTF2H3Q13889 308 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 PKN3Q6P5Z2 889 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 SHCBP1Q8NEM2 672 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 OSBPL10Q9BXB5 764 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 ILKAPQ9H0C8 392 aaPredicted RBP12.36□□□□□ -0.43
SYNPO-202ENST00000394243 ARHGEF3Q9NR81 526 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 ZBTB5O15062 677 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 TDP2O95551 362 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 ADORA2BP29275 332 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 UGP2Q16851 508 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 THEMIS2Q5TEJ8 643 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 FAM20AQ96MK3 541 aa12.36□□□□□ -0.43
SYNPO-202ENST00000394243 DNMT1P26358 1616 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms