RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 MAST4O15021 2626 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 FRMD3A2A2Y4 597 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 GIPC1O14908 333 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 XYLBO75191 536 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 CSDE1O75534 798 aaKnown RBP12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 KIF20AO95235 890 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 CD44P16070 742 aaKnown RBP12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 DEKP35659 375 aaKnown RBP12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 OR1G1P47890 313 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 CDC42EP1Q00587 391 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 PRKCEQ02156 737 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 EHHADHQ08426 723 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 STK4Q13043 487 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 PAK1Q13153 545 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 TPD52L1Q16890 204 aaPredicted RBP12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 PPM1LQ5SGD2 360 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 GLYCTKQ8IVS8 523 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 FAM3CQ92520 227 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 CEP170P1Q96L14 293 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 PARVGQ9HBI0 331 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 SLC39A2Q9NP94 309 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 SEL1LQ9UBV2 794 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 SEPT9Q9UHD8 586 aaPredicted RBP12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 RWDD2AQ9UIY3 292 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 FBXW11Q9UKB1 542 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 PCDHB2Q9Y5E7 798 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 PCDHGA5Q9Y5G8 931 aa12.03□□□□□ -0.48
VTI1BP2-201ENST00000394154 BICDL2A1A5D9 508 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 K7ESF4 209 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 STBD1O95210 358 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 POMCP01189 267 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 OATP04181 439 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 AFF1P51825 1210 aaKnown RBP12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 NPEPPSP55786 919 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 PLCB2Q00722 1185 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 USP41Q3LFD5 358 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 PLA2G2CQ5R387 149 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 SPATA1Q5VX52 437 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 HEATR6Q6AI08 1181 aaKnown RBP12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 ANO5Q75V66 913 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 WDR5BQ86VZ2 330 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 COLGALT2Q8IYK4 626 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 GUF1Q8N442 669 aaKnown RBP12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 MYCT1Q8N699 235 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 NELFBQ8WX92 580 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 ELSPBP1Q96BH3 223 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 DRC1Q96MC2 740 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 NIFKQ9BYG3 293 aaKnown RBP12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 PLA2G2FQ9BZM2 168 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 INO80BQ9C086 356 aaPredicted RBP12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 POLIQ9UNA4 740 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 CTNND2Q9UQB3 1225 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 FARP1Q9Y4F1 1045 aaPredicted RBP12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 PPME1Q9Y570 386 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 SMG1Q96Q15 3661 aaKnown RBP12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 F5P12259 2224 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 ARID2Q68CP9 1835 aa12.02□□□□□ -0.49
VTI1BP2-201ENST00000394154 COL4A2P08572 1712 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 SPAG17Q6Q759 2223 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 CCL16O15467 120 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 USO1O60763 962 aaKnown RBP12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 HIP1RO75146 1068 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 DGAT1O75907 488 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 TOP3BO95985 862 aaKnown RBP12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 C8AP07357 584 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 POU2F2P09086 479 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 CHRNB1P11230 501 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 HOXA6P31267 233 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 RAP1GAPP47736 663 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 STX17P56962 302 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 NCAPHQ15003 741 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 SH3PXD2AQ5TCZ1 1133 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 DAB2IPQ5VWQ8 1189 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 PLA2G4FQ68DD2 849 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 STXBP4Q6ZWJ1 553 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 CACNA2D4Q7Z3S7 1137 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 MRPL10Q7Z7H8 261 aaKnown RBP12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 PDZD3Q86UT5 571 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 SFR1Q86XK3 245 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 EXOC8Q8IYI6 725 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 KIAA0895Q8NCT3 520 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 MCPH1Q8NEM0 835 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 HPS3Q969F9 1004 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 BRD9Q9H8M2 597 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 MRPL44Q9H9J2 332 aaKnown RBP12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 VPS45Q9NRW7 570 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 GDE1Q9NZC3 331 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 TBC1D7Q9P0N9 293 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 MAPK8IP1Q9UQF2 711 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 NEUROG3Q9Y4Z2 214 aa12.01□□□□□ -0.49
VTI1BP2-201ENST00000394154 HELZ2Q9BYK8 2649 aaKnown RBP12□□□□□ -0.49
VTI1BP2-201ENST00000394154 A0A087WZ62 844 aa12□□□□□ -0.49
VTI1BP2-201ENST00000394154 TMEM150BA6NC51 233 aa12□□□□□ -0.49
VTI1BP2-201ENST00000394154 SFI1A8K8P3 1242 aa12□□□□□ -0.49
VTI1BP2-201ENST00000394154 CEACAM1P13688 526 aa12□□□□□ -0.49
VTI1BP2-201ENST00000394154 RPL17P18621 184 aaKnown RBP12□□□□□ -0.49
VTI1BP2-201ENST00000394154 CDK11BP21127 795 aaKnown RBP12□□□□□ -0.49
VTI1BP2-201ENST00000394154 CCNE1P24864 410 aa12□□□□□ -0.49
VTI1BP2-201ENST00000394154 MPLP40238 635 aa12□□□□□ -0.49
VTI1BP2-201ENST00000394154 ZNF131P52739 623 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms