RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 GDAP2Q9NXN4 497 aa20.17■□□□□ 0.82
NME1-203ENST00000393196 FBXL5Q9UKA1 691 aa20.17■□□□□ 0.82
NME1-203ENST00000393196 PDCD11Q14690 1871 aaKnown RBP20.16■□□□□ 0.82
NME1-203ENST00000393196 ATG2AQ2TAZ0 1938 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 SPTLC1O15269 473 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 SLC16A3O15427 465 aaKnown RBP20.16■□□□□ 0.82
NME1-203ENST00000393196 STX10O60499 249 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 PHACTR2O75167 634 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 PAPLNO95428 1278 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 CCNE1P24864 410 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 ATICP31939 592 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 ELF1P32519 619 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 SMARCB1Q12824 385 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 BFSP1Q12934 665 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 DPH6Q7L8W6 267 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 GLYCTKQ8IVS8 523 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 OR5B17Q8NGF7 314 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 SUSD6Q92537 303 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 ERCC4Q92889 916 aaPredicted RBP20.16■□□□□ 0.82
NME1-203ENST00000393196 HPDLQ96IR7 371 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 NUP62CLQ9H1M0 184 aa20.16■□□□□ 0.82
NME1-203ENST00000393196 ZMYND10O75800 440 aa20.15■□□□□ 0.82
NME1-203ENST00000393196 STAU1O95793 577 aaKnown RBP20.15■□□□□ 0.82
NME1-203ENST00000393196 MBD3O95983 291 aa20.15■□□□□ 0.82
NME1-203ENST00000393196 POU2F2P09086 479 aa20.15■□□□□ 0.82
NME1-203ENST00000393196 FAM163BP0C2L3 166 aa20.15■□□□□ 0.82
NME1-203ENST00000393196 CPB1P15086 417 aa20.15■□□□□ 0.82
NME1-203ENST00000393196 CASP4P49662 377 aa20.15■□□□□ 0.82
NME1-203ENST00000393196 VAMP7P51809 220 aa20.15■□□□□ 0.82
NME1-203ENST00000393196 ROR1Q01973 937 aa20.15■□□□□ 0.82
NME1-203ENST00000393196 CBX2Q14781 532 aaPredicted RBP20.15■□□□□ 0.82
NME1-203ENST00000393196 RARS2Q5T160 578 aaKnown RBP20.15■□□□□ 0.82
NME1-203ENST00000393196 LMBRD2Q68DH5 695 aaPredicted RBP20.15■□□□□ 0.82
NME1-203ENST00000393196 GPR149Q86SP6 731 aa20.15■□□□□ 0.82
NME1-203ENST00000393196 TOP6BLQ8N6T0 577 aa20.15■□□□□ 0.82
NME1-203ENST00000393196 CXorf38Q8TB03 319 aa20.15■□□□□ 0.82
NME1-203ENST00000393196 SYAP1Q96A49 352 aaPredicted RBP20.15■□□□□ 0.82
NME1-203ENST00000393196 UHRF1Q96T88 793 aaPredicted RBP20.15■□□□□ 0.82
NME1-203ENST00000393196 AFF4Q9UHB7 1163 aaKnown RBP20.15■□□□□ 0.82
NME1-203ENST00000393196 SIX4Q9UIU6 781 aa20.15■□□□□ 0.82
NME1-203ENST00000393196 TRIP11Q15643 1979 aa20.15■□□□□ 0.82
NME1-203ENST00000393196 TTC28Q96AY4 2481 aa20.14■□□□□ 0.82
NME1-203ENST00000393196 PTPRJQ12913 1337 aa20.14■□□□□ 0.81
NME1-203ENST00000393196 LRRIQ3A6PVS8 624 aaPredicted RBP20.14■□□□□ 0.81
NME1-203ENST00000393196 XYLBO75191 536 aa20.14■□□□□ 0.81
NME1-203ENST00000393196 AKAP3O75969 853 aa20.14■□□□□ 0.81
NME1-203ENST00000393196 ABLIM3O94929 683 aa20.14■□□□□ 0.81
NME1-203ENST00000393196 GTF2H1P32780 548 aa20.14■□□□□ 0.81
NME1-203ENST00000393196 BIRC3Q13489 604 aa20.14■□□□□ 0.81
NME1-203ENST00000393196 CAMK4Q16566 473 aa20.14■□□□□ 0.81
NME1-203ENST00000393196 ADHFE1Q8IWW8 467 aa20.14■□□□□ 0.81
NME1-203ENST00000393196 BORCS6Q96GS4 357 aa20.14■□□□□ 0.81
NME1-203ENST00000393196 CEP63Q96MT8 703 aa20.14■□□□□ 0.81
NME1-203ENST00000393196 PHF7Q9BWX1 381 aaPredicted RBP20.14■□□□□ 0.81
NME1-203ENST00000393196 REV3LO60673 3130 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 BIN1O00499 593 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 PRRG1O14668 218 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 ADAM12O43184 909 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 FGFR1OPO95684 399 aaKnown RBP20.13■□□□□ 0.81
NME1-203ENST00000393196 P4HA1P13674 534 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 IL9P15248 144 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 ATF2P15336 505 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 LHX1P48742 406 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 MYL7Q01449 175 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 PPM1LQ5SGD2 360 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 RSPO2Q6UXX9 243 aaPredicted RBP20.13■□□□□ 0.81
NME1-203ENST00000393196 ZC3H3Q8IXZ2 948 aaKnown RBP20.13■□□□□ 0.81
NME1-203ENST00000393196 TCEAL8Q8IYN2 117 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 MLKLQ8NB16 471 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 TAF4BQ92750 862 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 METTL14Q9HCE5 456 aaKnown RBP20.13■□□□□ 0.81
NME1-203ENST00000393196 NR2E1Q9Y466 385 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 TIMM13Q9Y5L4 95 aaPredicted RBP20.13■□□□□ 0.81
NME1-203ENST00000393196 SNX9Q9Y5X1 595 aa20.13■□□□□ 0.81
NME1-203ENST00000393196 CCDC195A0A1B0GUA6 201 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 C8AP07357 584 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 PCSK1P29120 753 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 ARPP19P56211 112 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 MCCD1P59942 119 aaPredicted RBP20.12■□□□□ 0.81
NME1-203ENST00000393196 TNNC1P63316 161 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 TSPY1Q01534 308 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 PAK1Q13153 545 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 GPR17Q13304 367 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 ZACNQ401N2 412 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 ANKRD40Q6AI12 368 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 TMC5Q6UXY8 1006 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 DCP1BQ8IZD4 617 aaKnown RBP20.12■□□□□ 0.81
NME1-203ENST00000393196 C2orf15Q8WU43 125 aaKnown RBP20.12■□□□□ 0.81
NME1-203ENST00000393196 NELFBQ8WX92 580 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 PRKD2Q9BZL6 878 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 IMPG2Q9BZV3 1241 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 GZF1Q9H116 711 aaPredicted RBP20.12■□□□□ 0.81
NME1-203ENST00000393196 VRTNQ9H8Y1 702 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 PIDD1Q9HB75 910 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 HSFX1Q9UBD0 423 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 DACH1Q9UI36 760 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 A0A0C4DFX4 3053 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 UNC80Q8N2C7 3258 aa20.12■□□□□ 0.81
NME1-203ENST00000393196 WDR27A2RRH5 827 aa20.11■□□□□ 0.81
NME1-203ENST00000393196 PPP1R3GB7ZBB8 358 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms