RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 KCNH4Q9UQ05 1017 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 SGPL1O95470 568 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 H2AFXP16104 143 aaPredicted RBP13.26□□□□□ -0.29
CLTC-202ENST00000393043 BRD2P25440 801 aaKnown RBP13.26□□□□□ -0.29
CLTC-202ENST00000393043 GRIK1P39086 918 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 CPT1AP50416 773 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 ITGA8P53708 1063 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 ESRRGP62508 458 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 TBX2Q13207 712 aaPredicted RBP13.26□□□□□ -0.29
CLTC-202ENST00000393043 ZNF235Q14590 738 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 PDK1Q15118 436 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 E2F4Q16254 413 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 MPZL3Q6UWV2 235 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 EP400NLQ6ZTU2 488 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 DDX4Q9NQI0 724 aaKnown RBP13.26□□□□□ -0.29
CLTC-202ENST00000393043 AIPL1Q9NZN9 384 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 PIK3R2O00459 728 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 PDGFRBP09619 1106 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 PMS1P54277 932 aaKnown RBP13.26□□□□□ -0.29
CLTC-202ENST00000393043 OAZ1P54368 228 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 SESN2P58004 480 aaPredicted RBP13.26□□□□□ -0.29
CLTC-202ENST00000393043 ZNF200P98182 395 aaPredicted RBP13.26□□□□□ -0.29
CLTC-202ENST00000393043 EPC2Q52LR7 807 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 ZNF710Q8N1W2 664 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 BTBD6Q96KE9 485 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 ZBED2Q9BTP6 218 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 ECT2Q9H8V3 914 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 SLIT3O75094 1523 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 DFFAO00273 331 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 CYTH3O43739 400 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 BNIP3LO60238 219 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 KITP10721 976 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 POU5F1BQ06416 359 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 ANO4Q32M45 955 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 PPHLN1Q8NEY8 458 aaKnown RBP13.26□□□□□ -0.29
CLTC-202ENST00000393043 OR6P1Q8NGX9 317 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 SLC5A5Q92911 643 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 ADARB2Q9NS39 739 aaKnown RBP13.26□□□□□ -0.29
CLTC-202ENST00000393043 TJP2Q9UDY2 1190 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 CCDC195A0A1B0GUA6 201 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 F5H423 210 aaPredicted RBP13.26□□□□□ -0.29
CLTC-202ENST00000393043 MTSS1O43312 755 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 DIAPH2O60879 1101 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 ITGB3P05106 788 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 NLRP11P59045 1033 aaKnown RBP13.26□□□□□ -0.29
CLTC-202ENST00000393043 DDX42Q86XP3 938 aaKnown RBP eCLIP13.26□□□□□ -0.29
CLTC-202ENST00000393043 KIRREL3Q8IZU9 778 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 C1orf131Q8NDD1 294 aaKnown RBP13.26□□□□□ -0.29
CLTC-202ENST00000393043 DUSP10Q9Y6W6 482 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 KCNJ1P48048 391 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 TAF6P49848 677 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 CYP24A1Q07973 514 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 GOLGA7BQ2TAP0 167 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 PDCD6IPQ8WUM4 868 aaKnown RBP13.26□□□□□ -0.29
CLTC-202ENST00000393043 MKL1Q969V6 931 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 SPON2Q9BUD6 331 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 FAM49BQ9NUQ9 324 aa13.26□□□□□ -0.29
CLTC-202ENST00000393043 ATRNO75882 1429 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 EEF2KO00418 725 aaKnown RBP13.25□□□□□ -0.29
CLTC-202ENST00000393043 ATP9BO43861 1147 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 CYP3A4P08684 503 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 STIP1P31948 543 aaKnown RBP13.25□□□□□ -0.29
CLTC-202ENST00000393043 GNL1P36915 607 aaPredicted RBP13.25□□□□□ -0.29
CLTC-202ENST00000393043 GTF2A2P52657 109 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 MORF4L2Q15014 288 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 KRT80Q6KB66 452 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 PPIL6Q8IXY8 311 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 RIN2Q8WYP3 895 aaPredicted RBP13.25□□□□□ -0.29
CLTC-202ENST00000393043 PNKPQ96T60 521 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 METTL5Q9NRN9 209 aaKnown RBP13.25□□□□□ -0.29
CLTC-202ENST00000393043 UBR1Q8IWV7 1749 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 A0A087X0B3 334 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 LRRC10BA6NIK2 292 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 TGFB3P10600 412 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 LSP1P33241 339 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 LAMB3Q13751 1172 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 PGM5Q15124 567 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 KYNUQ16719 465 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 OTOP1Q7RTM1 612 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 ZNF571Q7Z3V5 609 aaPredicted RBP13.25□□□□□ -0.29
CLTC-202ENST00000393043 DDX27Q96GQ7 796 aaKnown RBP13.25□□□□□ -0.29
CLTC-202ENST00000393043 DUSP9Q99956 384 aaKnown RBP13.25□□□□□ -0.29
CLTC-202ENST00000393043 NUDT12Q9BQG2 462 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 PSMC6P62333 389 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 GRAMD1BQ3KR37 738 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 TEDDM1Q5T9Z0 273 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 MTMR9Q96QG7 549 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 USP15Q9Y4E8 981 aaPredicted RBP13.25□□□□□ -0.29
CLTC-202ENST00000393043 NPTXRO95502 500 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 VDRP11473 427 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 GCLCP48506 637 aaPredicted RBP13.25□□□□□ -0.29
CLTC-202ENST00000393043 ZNF157P51786 506 aaPredicted RBP13.25□□□□□ -0.29
CLTC-202ENST00000393043 MEI1Q5TIA1 1274 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 C1orf146Q5VVC0 180 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 OR2W6PQ8NHA6 318 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 SPIRE2Q8WWL2 714 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 SERPINB12Q96P63 405 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 MTFR1LQ9H019 292 aa13.25□□□□□ -0.29
CLTC-202ENST00000393043 PABPC3Q9H361 631 aaKnown RBP13.25□□□□□ -0.29
CLTC-202ENST00000393043 BLOC1S4Q9NUP1 217 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms