RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ARMC4Q5T2S8 1044 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 RASSF5Q8WWW0 418 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 NDST4Q9H3R1 872 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 FBXO40Q9UH90 709 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 SH3GLB1Q9Y371 365 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 ARHGEF7Q14155 803 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 LINC00523Q86TU6 105 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 CROCCP3Q8IVE0 287 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 SH3RF3Q8TEJ3 882 aaPredicted RBP15.38■□□□□ 0.05
CCDC50-201ENST00000392455 TRPM5Q9NZQ8 1165 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 DENND3A2RUS2 1198 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 PRIM2P49643 509 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 ACTR2P61160 394 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 TIGD7Q6NT04 549 aaPredicted RBP15.38■□□□□ 0.05
CCDC50-201ENST00000392455 ULK2Q8IYT8 1036 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 MMGT1Q8N4V1 131 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 SVOPQ8N4V2 548 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 ECSITQ9BQ95 431 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 CCNE1P24864 410 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 LTKP29376 864 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 CIAPIN1Q6FI81 312 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 NLRP14Q86W24 1093 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 PPM1NQ8N819 430 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 LINC00301Q8NCQ3 95 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 TNIP3Q96KP6 325 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 S100A13Q99584 98 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 SNX4O95219 450 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 SCFD2Q8WU76 684 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 UBE2OQ9C0C9 1292 aaKnown RBP15.38■□□□□ 0.05
CCDC50-201ENST00000392455 ADAM21Q9UKJ8 722 aa15.38■□□□□ 0.05
CCDC50-201ENST00000392455 IRAK1BP1Q5VVH5 260 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 SCN4BQ8IWT1 228 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 CYP39A1Q9NYL5 469 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 PIPSLA2A3N6 862 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 PPP2R1BP30154 601 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 ITGADQ13349 1161 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 TIMM50Q3ZCQ8 353 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 LIN54Q6MZP7 749 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 VSTM4Q8IW00 320 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 SLC24A3Q9HC58 644 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 hCG_2014768A0A024R1R8 64 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 PDE5AO76074 875 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 UQCRBP14927 111 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 PUDPQ08623 228 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 AP3B2Q13367 1082 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 OSBP2Q969R2 916 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 TIPINQ9BVW5 301 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 PKP3Q9Y446 797 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 SEC24DO94855 1032 aaPredicted RBP15.37■□□□□ 0.05
CCDC50-201ENST00000392455 HOXD10P28358 340 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 YWHAZP63104 245 aaKnown RBP15.37■□□□□ 0.05
CCDC50-201ENST00000392455 WDR48Q8TAF3 677 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 CD209Q9NNX6 404 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 ACCSLQ4AC99 568 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 ZNF618Q5T7W0 954 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 KIAA0408Q6ZU52 694 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 STKLD1Q8NE28 680 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 SHCBP1Q8NEM2 672 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 ENKURQ8TC29 256 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 KLHL25Q9H0H3 589 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 F5H423 210 aaPredicted RBP15.37■□□□□ 0.05
CCDC50-201ENST00000392455 CLCN6P51797 869 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 RTKN2Q8IZC4 609 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 WDR35Q9P2L0 1181 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 SRP68Q9UHB9 627 aaKnown RBP15.37■□□□□ 0.05
CCDC50-201ENST00000392455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.37■□□□□ 0.05
CCDC50-201ENST00000392455 PLEKHA8P1O95397 391 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 PPP3CCP48454 512 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 PEX5P50542 639 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 CLCC1Q96S66 551 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 RPS6KB2Q9UBS0 482 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 STARD13Q9Y3M8 1113 aa15.37■□□□□ 0.05
CCDC50-201ENST00000392455 HOXC8P31273 242 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 SPANXN2Q5MJ10 180 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 FAM83BQ5T0W9 1011 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 FAM47EQ6ZV65 393 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 BHMT2Q9H2M3 363 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 ABCB11O95342 1321 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 RCVRNP35243 200 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 GRK3P35626 688 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 SLC16A1P53985 500 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 HIRAP54198 1017 aaPredicted RBP15.36■□□□□ 0.05
CCDC50-201ENST00000392455 PSMD4P55036 377 aaKnown RBP15.36■□□□□ 0.05
CCDC50-201ENST00000392455 CDK20Q8IZL9 346 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 APBB2Q92870 758 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 C20orf96Q9NUD7 363 aaPredicted RBP15.36■□□□□ 0.05
CCDC50-201ENST00000392455 LIMA1Q9UHB6 759 aaKnown RBP15.36■□□□□ 0.05
CCDC50-201ENST00000392455 F8W810 466 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 KLHL41O60662 606 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 CCDC157Q569K6 752 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 KCNV1Q6PIU1 500 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 SPATA21Q7Z572 469 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 THNSL1Q8IYQ7 743 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 DCAF4Q8WV16 495 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 SLC13A1Q9BZW2 595 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 RNF123Q5XPI4 1314 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 DYTNA2CJ06 578 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 MYL4P12829 197 aa15.36■□□□□ 0.05
CCDC50-201ENST00000392455 GTF2E2P29084 291 aaKnown RBP15.36■□□□□ 0.05
CCDC50-201ENST00000392455 GRAPQ13588 217 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms