RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 FAM163BP0C2L3 166 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 ODC1P11926 461 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 TYMPP19971 482 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 IRS1P35568 1242 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 SOWAHAQ2M3V2 549 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 ZNF667Q5HYK9 610 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 WDR44Q5JSH3 913 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 PDE12Q6L8Q7 609 aaKnown RBP16.6■□□□□ 0.25
PDGFB-202ENST00000381551 KIAA1841Q6NSI8 718 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 GBP6Q6ZN66 633 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 Q7L0L9 218 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 TOP6BLQ8N6T0 577 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 MRPL43Q8N983 215 aaKnown RBP16.6■□□□□ 0.25
PDGFB-202ENST00000381551 CCDC150Q8NCX0 1101 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 MICAL1Q8TDZ2 1067 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 TATDN2Q93075 761 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 MRPL38Q96DV4 380 aaKnown RBP16.6■□□□□ 0.25
PDGFB-202ENST00000381551 IMPG2Q9BZV3 1241 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 RBSNQ9H1K0 784 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 APOBEC3GQ9HC16 384 aaKnown RBP16.6■□□□□ 0.25
PDGFB-202ENST00000381551 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.6■□□□□ 0.25
PDGFB-202ENST00000381551 MRPL17Q9NRX2 175 aaKnown RBP16.6■□□□□ 0.25
PDGFB-202ENST00000381551 LMCD1Q9NZU5 365 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 NXF1Q9UBU9 619 aaKnown RBP16.6■□□□□ 0.25
PDGFB-202ENST00000381551 IRAK3Q9Y616 596 aa16.6■□□□□ 0.25
PDGFB-202ENST00000381551 CDH23Q9H251 3354 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 ARHGEF37A1IGU5 675 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 TPM2P07951 284 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 SLC9A1P19634 815 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 POU3F3P20264 500 aaPredicted RBP16.59■□□□□ 0.25
PDGFB-202ENST00000381551 NOP14P78316 857 aaKnown RBP16.59■□□□□ 0.25
PDGFB-202ENST00000381551 KCNMA1Q12791 1236 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 ADGRE1Q14246 886 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 BMS1Q14692 1282 aaKnown RBP16.59■□□□□ 0.25
PDGFB-202ENST00000381551 PTPN14Q15678 1187 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 PTPROQ16827 1216 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 VARS2Q5ST30 1063 aaKnown RBP16.59■□□□□ 0.25
PDGFB-202ENST00000381551 WSCD1Q658N2 575 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 PDCL2Q8N4E4 241 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 AUTS2Q8WXX7 1259 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 RIN2Q8WYP3 895 aaPredicted RBP16.59■□□□□ 0.25
PDGFB-202ENST00000381551 PIK3R5Q8WYR1 880 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 FAXDC2Q96IV6 333 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 MMS19Q96T76 1030 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 CRACR2AQ9BSW2 395 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 DSEQ9UL01 958 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 L1RE1Q9UN81 338 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 POLIQ9UNA4 740 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 SSX2IPQ9Y2D8 614 aa16.59■□□□□ 0.25
PDGFB-202ENST00000381551 C2orf71A6NGG8 1288 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 HIDE1A8MVS5 230 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 PES1O00541 588 aaKnown RBP16.58■□□□□ 0.24
PDGFB-202ENST00000381551 C2CD2LO14523 706 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 TBC1D4O60343 1298 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 URODP06132 367 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 P4HA1P13674 534 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 PON1P27169 355 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 ASPAP45381 313 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 TNNC1P63316 161 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 FANCCQ00597 558 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 YWHAHQ04917 246 aaPredicted RBP16.58■□□□□ 0.24
PDGFB-202ENST00000381551 SMC1AQ14683 1233 aaKnown RBP16.58■□□□□ 0.24
PDGFB-202ENST00000381551 EXOC3L4Q17RC7 722 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 PDXDC1Q6P996 788 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 PRSS55Q6UWB4 352 aaPredicted RBP16.58■□□□□ 0.24
PDGFB-202ENST00000381551 ANKS3Q6ZW76 656 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 METTL23Q86XA0 190 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 TMEM86AQ8N2M4 240 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 DEFB123Q8N688 67 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 NAP1L5Q96NT1 182 aaPredicted RBP16.58■□□□□ 0.24
PDGFB-202ENST00000381551 INTS2Q9H0H0 1204 aaKnown RBP16.58■□□□□ 0.24
PDGFB-202ENST00000381551 RXFP1Q9HBX9 757 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 RTN4Q9NQC3 1192 aaKnown RBP16.58■□□□□ 0.24
PDGFB-202ENST00000381551 ENTPD7Q9NQZ7 604 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 PCDHGC5Q9Y5F6 944 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 BACE2Q9Y5Z0 518 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 VWA8A3KMH1 1905 aa16.58■□□□□ 0.24
PDGFB-202ENST00000381551 A0A1B0GTH6 734 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 LGALS16A8MUM7 142 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 GABRDO14764 452 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 TACC1O75410 805 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 SERPINC1P01008 464 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 CDH8P55286 799 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 UBXN1Q04323 297 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 LRMPQ12912 555 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 NR1I3Q14994 352 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 PLPP4Q5VZY2 271 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 OVOS1Q6IE37 1185 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 PHLDB3Q6NSJ2 640 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 DPY19L2P1Q6NXN4 242 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 TRIM65Q6PJ69 517 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 SPATA18Q8TC71 538 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 KBTBD7Q8WVZ9 684 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 CDX2Q99626 313 aaPredicted RBP16.57■□□□□ 0.24
PDGFB-202ENST00000381551 CLSTN3Q9BQT9 956 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 MRPL45Q9BRJ2 306 aaKnown RBP16.57■□□□□ 0.24
PDGFB-202ENST00000381551 BCO2Q9BYV7 579 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 NIF3L1Q9GZT8 377 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 SDCBP2Q9H190 292 aa16.57■□□□□ 0.24
PDGFB-202ENST00000381551 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms