RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 GDF3Q9NR23 364 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 CAPN6Q9Y6Q1 641 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 MYO7AQ13402 2215 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 SRGNP10124 158 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 HUNKP57058 714 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 DPCR1Q3MIW9 517 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 STAG2Q8N3U4 1231 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 ZNF555Q8NEP9 628 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 URGCPQ8TCY9 931 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 DPF3Q92784 378 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 TATDN2Q93075 761 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 OLFML3Q9NRN5 406 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 TGDSO95455 350 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 PDE6AP16499 860 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 IFNA8P32881 189 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 ITKQ08881 620 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 RBL2Q08999 1139 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 TSTA3Q13630 321 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 SNX31Q8N9S9 440 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 USP38Q8NB14 1042 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 GOLM1Q8NBJ4 401 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 ARHGEF1Q92888 912 aaKnown RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 CD320Q9NPF0 282 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 DISC1Q9NRI5 854 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 SLC12A6Q9UHW9 1150 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 PLAGL2Q9UPG8 496 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 ANKRD6Q9Y2G4 727 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 LAMB2P55268 1798 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 UTYO14607 1347 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 KPNA3O00505 521 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 CD2BP2O95400 341 aaKnown RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 MAP4P27816 1152 aaKnown RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 FAM47AQ5JRC9 791 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 JADE1Q6IE81 842 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 MOXD1Q6UVY6 613 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 SYNE4Q8N205 404 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 ZKSCAN4Q969J2 545 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 BIRC8Q96P09 236 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 WRNIP1Q96S55 665 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 PRRG3Q9BZD7 231 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 TRIM45Q9H8W5 580 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 PARVGQ9HBI0 331 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 ATP6V1HQ9UI12 483 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 UMODL1Q5DID0 1318 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 C5orf60A6NFR6 353 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 TXNDC9O14530 226 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 STAM2O75886 525 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 MT-ND3P03897 115 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 FAM58BPP0C7Q3 252 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 PAMP19021 973 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 JAK1P23458 1154 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 EIF2B5Q13144 721 aaKnown RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 GK3PQ14409 553 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 STILQ15468 1287 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 TAF1BQ53T94 588 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 NUDT18Q6ZVK8 323 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 THAP11Q96EK4 314 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 TSPAN17Q96FV3 270 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 FAM227BQ96M60 508 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 ST14Q9Y5Y6 855 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 TIAM2Q8IVF5 1701 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 DDHD2O94830 711 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 S100BP04271 92 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 PDIA3P30101 505 aaKnown RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 USP11P51784 963 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 TMPRSS6Q8IU80 811 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 LARP4BQ92615 738 aaKnown RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 OSBPL11Q9BXB4 747 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 NDST4Q9H3R1 872 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 MAN1B1Q9UKM7 699 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 TNRC6CQ9HCJ0 1690 aaKnown RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 ECE2O60344 883 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 CLPTM1O96005 669 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 APOEP02649 317 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 FECHP22830 423 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 CCDC137Q6PK04 289 aaKnown RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 RRAGAQ7L523 313 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 BLIDQ8IZY5 108 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 CHCHD4Q8N4Q1 142 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 LRRC39Q96DD0 335 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 SLC12A4Q9UP95 1085 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 IRGMA1A4Y4 181 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 K7ENM7 598 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 ST13P50502 369 aaKnown RBP5.1□□□□□ -1.59
PTPRD-203ENST00000381196 SCRN3Q0VDG4 424 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 CSTF3Q12996 717 aaKnown RBP5.1□□□□□ -1.59
PTPRD-203ENST00000381196 RASA2Q15283 850 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 MTFR1Q15390 333 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 CDKAL1Q5VV42 579 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 ERAP2Q6P179 960 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 FAM160B2Q86V87 743 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 C7orf31Q8N865 590 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 PDZD8Q8NEN9 1154 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 RFWD2Q8NHY2 731 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 TRIM56Q9BRZ2 755 aaKnown RBP5.1□□□□□ -1.59
PTPRD-203ENST00000381196 EBF2Q9HAK2 575 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 SMCO2A6NFE2 343 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 LRRC10BA6NIK2 292 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 USP17L12C9JPN9 530 aa5.1□□□□□ -1.59
PTPRD-203ENST00000381196 USP17L21D6R901 530 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms