RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 LIMS2Q7Z4I7 341 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 EHBP1Q8NDI1 1231 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 TATDN2Q93075 761 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 NAP1L5Q96NT1 182 aaPredicted RBP13.59□□□□□ -0.23
SMN1-202ENST00000380707 HERC2P3Q9BVR0 1158 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 TLR9Q9NR96 1032 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 GCNT4Q9P109 453 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 STK39Q9UEW8 545 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 PCDHB8Q9UN66 801 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 L1RE1Q9UN81 338 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 POLIQ9UNA4 740 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 PCDHGC5Q9Y5F6 944 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 GTPBP10A4D1E9 387 aaKnown RBP13.59□□□□□ -0.23
SMN1-202ENST00000380707 LGALS16A8MUM7 142 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 C2CD2LO14523 706 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 SYN3O14994 580 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 HUS1O60921 280 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 TPM2P07951 284 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 CTSAP10619 480 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 ODC1P11926 461 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 SLC9A1P19634 815 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 IRS1P35568 1242 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 FANCCQ00597 558 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 APBA1Q02410 837 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 DSG1Q02413 1049 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 LRMPQ12912 555 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 EXOC3L4Q17RC7 722 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 ZNF667Q5HYK9 610 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 WDR44Q5JSH3 913 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 WSCD1Q658N2 575 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 GBP6Q6ZN66 633 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 TMC7Q7Z402 723 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 PDCL2Q8N4E4 241 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 CCDC150Q8NCX0 1101 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 MMS19Q96T76 1030 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 TCF25Q9BQ70 676 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 IMPG2Q9BZV3 1241 aa13.59□□□□□ -0.23
SMN1-202ENST00000380707 INTS2Q9H0H0 1204 aaKnown RBP13.59□□□□□ -0.23
SMN1-202ENST00000380707 VWA8A3KMH1 1905 aa13.58□□□□□ -0.23
SMN1-202ENST00000380707 FSCN2O14926 492 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 TEX33O43247 280 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 LILRB3O75022 631 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 CXCL14O95715 111 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 SERPINC1P01008 464 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 CYP11A1P05108 521 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 TYMPP19971 482 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 PON1P27169 355 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 ASPAP45381 313 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 GLUD2P49448 558 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 CDH8P55286 799 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 TNNC1P63316 161 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 UBXN1Q04323 297 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 KCNMA1Q12791 1236 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 PTPN14Q15678 1187 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 VARS2Q5ST30 1063 aaKnown RBP13.58□□□□□ -0.24
SMN1-202ENST00000380707 PLPP4Q5VZY2 271 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 KIAA1841Q6NSI8 718 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 TRIM65Q6PJ69 517 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 PRSS55Q6UWB4 352 aaPredicted RBP13.58□□□□□ -0.24
SMN1-202ENST00000380707 SCARA5Q6ZMJ2 495 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 TOP6BLQ8N6T0 577 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 APPL2Q8NEU8 664 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 LNX1Q8TBB1 728 aaPredicted RBP13.58□□□□□ -0.24
SMN1-202ENST00000380707 MICAL1Q8TDZ2 1067 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 RIN2Q8WYP3 895 aaPredicted RBP13.58□□□□□ -0.24
SMN1-202ENST00000380707 SMYD3Q9H7B4 428 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 RTN4Q9NQC3 1192 aaKnown RBP13.58□□□□□ -0.24
SMN1-202ENST00000380707 ENTPD7Q9NQZ7 604 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 MYO7AQ13402 2215 aa13.58□□□□□ -0.24
SMN1-202ENST00000380707 COL4A4P53420 1690 aaPredicted RBP13.57□□□□□ -0.24
SMN1-202ENST00000380707 A0A1B0GTH6 734 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 HIDE1A8MVS5 230 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 OAZ2O95190 189 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 URODP06132 367 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 RAP1GAPP47736 663 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 MRPL58Q14197 206 aaKnown RBP13.57□□□□□ -0.24
SMN1-202ENST00000380707 ADGRE1Q14246 886 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 OVOS1Q6IE37 1185 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 PHLDB3Q6NSJ2 640 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 DPY19L2P1Q6NXN4 242 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 DPH6Q7L8W6 267 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 MRPL43Q8N983 215 aaKnown RBP13.57□□□□□ -0.24
SMN1-202ENST00000380707 KBTBD7Q8WVZ9 684 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 PIK3R5Q8WYR1 880 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 MRPL38Q96DV4 380 aaKnown RBP13.57□□□□□ -0.24
SMN1-202ENST00000380707 ARID3AQ99856 593 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 MRPL45Q9BRJ2 306 aaKnown RBP13.57□□□□□ -0.24
SMN1-202ENST00000380707 BCO2Q9BYV7 579 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 NIF3L1Q9GZT8 377 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 LMAN2LQ9H0V9 348 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 SDCBP2Q9H190 292 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 NGRNQ9NPE2 291 aaKnown RBP13.57□□□□□ -0.24
SMN1-202ENST00000380707 MRPL17Q9NRX2 175 aaKnown RBP13.57□□□□□ -0.24
SMN1-202ENST00000380707 DSEQ9UL01 958 aa13.57□□□□□ -0.24
SMN1-202ENST00000380707 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.56□□□□□ -0.24
SMN1-202ENST00000380707 C2orf71A6NGG8 1288 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 TACC1O75410 805 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 WEE2P0C1S8 567 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 P4HA1P13674 534 aa13.56□□□□□ -0.24
SMN1-202ENST00000380707 RPL17P18621 184 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms