RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 TTC23LQ6PF05 361 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 INTS8Q75QN2 995 aaKnown RBP6.93□□□□□ -1.3
RIPK1-202ENST00000380409 GABPB2Q8TAK5 448 aaPredicted RBP6.93□□□□□ -1.3
RIPK1-202ENST00000380409 FAM172AQ8WUF8 416 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 SYN2Q92777 582 aaPredicted RBP6.93□□□□□ -1.3
RIPK1-202ENST00000380409 BTBD9Q96Q07 612 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 PANX3Q96QZ0 392 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 RAB34Q9BZG1 259 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 GRIP2Q9C0E4 1043 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 KLC2Q9H0B6 622 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 PIH1D3Q9NQM4 214 aaKnown RBP6.93□□□□□ -1.3
RIPK1-202ENST00000380409 IP6K2Q9UHH9 426 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 GDAQ9Y2T3 454 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 SCN4AP35499 1836 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 EDF1O60869 148 aaKnown RBP6.93□□□□□ -1.3
RIPK1-202ENST00000380409 FGFR1OPO95684 399 aaKnown RBP6.93□□□□□ -1.3
RIPK1-202ENST00000380409 CAPNS1P04632 268 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 ABCB1P08183 1280 aaPredicted RBP6.93□□□□□ -1.3
RIPK1-202ENST00000380409 RARBP10826 455 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 PTGIRP43119 386 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 MAGEA1P43355 309 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 ALDH3B2P48448 385 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 ENTPD1P49961 510 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 CDK9P50750 372 aaKnown RBP6.93□□□□□ -1.3
RIPK1-202ENST00000380409 WDR4P57081 412 aaKnown RBP6.93□□□□□ -1.3
RIPK1-202ENST00000380409 KCNJ8Q15842 424 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 CCDC6Q16204 474 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 PLEKHG4Q58EX7 1191 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 RWDD4Q6NW29 188 aaKnown RBP6.93□□□□□ -1.3
RIPK1-202ENST00000380409 APOA5Q6Q788 366 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 ARHGEF18Q6ZSZ5 1173 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 USP43Q70EL4 1123 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 NLRP9Q7RTR0 991 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 HS6ST3Q8IZP7 471 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 ACMSDQ8TDX5 336 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 TGFBRAP1Q8WUH2 860 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 TP53INP1Q96A56 240 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 SNF8Q96H20 258 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 SERPINB12Q96P63 405 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 TUBGCP2Q9BSJ2 902 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 CELF4Q9BZC1 486 aaKnown RBP6.93□□□□□ -1.3
RIPK1-202ENST00000380409 NDEL1Q9GZM8 345 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 NT5C3AQ9H0P0 336 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 PALMDQ9NP74 551 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 GIN1Q9NXP7 522 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 ZBTB21Q9ULJ3 1066 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 PPM1HQ9ULR3 514 aa6.93□□□□□ -1.3
RIPK1-202ENST00000380409 TNKSO95271 1327 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 TAF1LQ8IZX4 1826 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 LRRC53A6NM62 1247 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 PEX1O43933 1283 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 CCDC22O60826 627 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 PDE8BO95263 885 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 VCLP18206 1134 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 PDE4DQ08499 809 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 TCP10Q12799 353 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 PDK3Q15120 406 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ZYXQ15942 572 aaKnown RBP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 CDONQ4KMG0 1287 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 TMC7Q7Z402 723 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 AMIGO3Q86WK7 504 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 AHI1Q8N157 1196 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ELMOD1Q8N336 334 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 SRBD1Q8N5C6 995 aaKnown RBP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ANKRD13CQ8N6S4 541 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 FANCBQ8NB91 859 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 VPS37AQ8NEZ2 397 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 EDEM3Q9BZQ6 932 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 SEMA4AQ9H3S1 761 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ZSWIM5Q9P217 1185 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 STK17AQ9UEE5 414 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 PPP1R9AQ9ULJ8 1098 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ERVK-11Q9UQG0 969 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 FER1L6Q2WGJ9 1857 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 K7EPI3 171 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 SLC22A1O15245 554 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 CCNT1O60563 726 aaKnown RBP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 PGM3O95394 542 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 FGFR1P11362 822 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ZNF132P52740 706 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 MYBPC1Q00872 1141 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 AMPD3Q01432 767 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 SP4Q02446 784 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 CHRNEQ04844 493 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 PPP2R5BQ15173 497 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 CYTH1Q15438 398 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 NANOGP8Q6NSW7 305 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 SLC30A10Q6XR72 485 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 RFPL4BQ6ZWI9 263 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 PHLDB2Q86SQ0 1253 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ZNF598Q86UK7 904 aaKnown RBP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ANKMY2Q8IV38 441 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 SLC38A6Q8IZM9 456 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 CENPSQ8N2Z9 138 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 METTL13Q8N6R0 699 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 OLIG1Q8TAK6 271 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 TRIM51Q9BSJ1 452 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 TDRD1Q9BXT4 1180 aaKnown RBP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 SLC2A11Q9BYW1 496 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms