RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 KPNA6O60684 536 aa21.14■□□□□ 0.97
PDLIM5-205ENST00000380180 PGK1P00558 417 aa21.14■□□□□ 0.97
PDLIM5-205ENST00000380180 FGGP02679 453 aa21.14■□□□□ 0.97
PDLIM5-205ENST00000380180 PEX5P50542 639 aa21.14■□□□□ 0.97
PDLIM5-205ENST00000380180 PRKCZQ05513 592 aa21.14■□□□□ 0.97
PDLIM5-205ENST00000380180 PTP4A2Q12974 167 aa21.14■□□□□ 0.97
PDLIM5-205ENST00000380180 ZNF211Q13398 564 aaPredicted RBP21.14■□□□□ 0.97
PDLIM5-205ENST00000380180 LIN9Q5TKA1 542 aa21.14■□□□□ 0.97
PDLIM5-205ENST00000380180 SMYD5Q6GMV2 418 aa21.14■□□□□ 0.97
PDLIM5-205ENST00000380180 MMS22LQ6ZRQ5 1243 aa21.14■□□□□ 0.97
PDLIM5-205ENST00000380180 UBE2Q2Q8WVN8 375 aa21.14■□□□□ 0.97
PDLIM5-205ENST00000380180 SMYD3Q9H7B4 428 aa21.14■□□□□ 0.97
PDLIM5-205ENST00000380180 PLEKHA5Q9HAU0 1116 aa21.14■□□□□ 0.97
PDLIM5-205ENST00000380180 SPOPO43791 374 aa21.13■□□□□ 0.97
PDLIM5-205ENST00000380180 AOC2O75106 756 aa21.13■□□□□ 0.97
PDLIM5-205ENST00000380180 MYBL2P10244 700 aa21.13■□□□□ 0.97
PDLIM5-205ENST00000380180 AXLP30530 894 aa21.13■□□□□ 0.97
PDLIM5-205ENST00000380180 RBP5P82980 135 aa21.13■□□□□ 0.97
PDLIM5-205ENST00000380180 CAP1Q01518 475 aa21.13■□□□□ 0.97
PDLIM5-205ENST00000380180 TRIM32Q13049 653 aa21.13■□□□□ 0.97
PDLIM5-205ENST00000380180 PPP1R2P3Q6NXS1 205 aa21.13■□□□□ 0.97
PDLIM5-205ENST00000380180 NME8Q8N427 588 aa21.13■□□□□ 0.97
PDLIM5-205ENST00000380180 RUBCNQ92622 972 aa21.13■□□□□ 0.97
PDLIM5-205ENST00000380180 TRIM7Q9C029 511 aa21.13■□□□□ 0.97
PDLIM5-205ENST00000380180 ITGA4P13612 1032 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 CRYBB1P53674 252 aaPredicted RBP21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 C1QBPQ07021 282 aaKnown RBP21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 CXCL17Q6UXB2 119 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 ZMAT2Q96NC0 199 aaKnown RBP21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 MTG1Q9BT17 334 aaPredicted RBP21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 TRIM6Q9C030 488 aaPredicted RBP21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 PCDHGC3Q9UN70 934 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 CCDC188H7C350 402 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 MAP2K7O14733 419 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 GLI1P08151 1106 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 MMP8P22894 467 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 RAD23BP54727 409 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 CBX1P83916 185 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 NOGQ13253 232 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 MAMLD1Q13495 774 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 MAP9Q49MG5 647 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 HDXQ7Z353 690 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 SNX27Q96L92 541 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 NXF3Q9H4D5 531 aaKnown RBP21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 PLEKHA4Q9H4M7 779 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 PIN4Q9Y237 131 aaKnown RBP21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 PCDHA3Q9Y5H8 950 aa21.12■□□□□ 0.97
PDLIM5-205ENST00000380180 CCDC66A2RUB6 948 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 MYO1FO00160 1098 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 LSM8O95777 96 aaKnown RBP21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 CTNNA1P35221 906 aaKnown RBP21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 YARSP54577 528 aaKnown RBP21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 CACNB2Q08289 660 aaPredicted RBP21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 PLEKHA7Q6IQ23 1121 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 AADACL2Q6P093 401 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 GSPT2Q8IYD1 628 aaKnown RBP21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 WDTC1Q8N5D0 677 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 TMEM35BQ8NCS4 154 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 C1orf131Q8NDD1 294 aaKnown RBP21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 WHAMMQ8TF30 809 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 UPF3AQ9H1J1 476 aaKnown RBP21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 CYP3A43Q9HB55 503 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 DERAQ9Y315 318 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 DNAH12Q6ZR08 3092 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 SEPT4O43236 478 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 RAD51CO43502 376 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 P4HA1P13674 534 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 CD19P15391 556 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 CTNNA2P26232 953 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 PLA2G4AP47712 749 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 ORC1Q13415 861 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 NBPF20Q3BBV1 942 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 ZNF518BQ9C0D4 1074 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 SPC25Q9HBM1 224 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 MRPL47Q9HD33 250 aaKnown RBP21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 NR2E1Q9Y466 385 aa21.11■□□□□ 0.97
PDLIM5-205ENST00000380180 SART1O43290 800 aaKnown RBP21.1■□□□□ 0.97
PDLIM5-205ENST00000380180 CILPO75339 1184 aa21.1■□□□□ 0.97
PDLIM5-205ENST00000380180 HEXIM1O94992 359 aaKnown RBP21.1■□□□□ 0.97
PDLIM5-205ENST00000380180 STAU1O95793 577 aaKnown RBP21.1■□□□□ 0.97
PDLIM5-205ENST00000380180 PAEPP09466 180 aa21.1■□□□□ 0.97
PDLIM5-205ENST00000380180 RARBP10826 455 aa21.1■□□□□ 0.97
PDLIM5-205ENST00000380180 ZBTB6Q15916 424 aa21.1■□□□□ 0.97
PDLIM5-205ENST00000380180 ALKAL1Q6UXT8 129 aa21.1■□□□□ 0.97
PDLIM5-205ENST00000380180 KRT222Q8N1A0 295 aa21.1■□□□□ 0.97
PDLIM5-205ENST00000380180 SLC4A11Q8NBS3 891 aa21.1■□□□□ 0.97
PDLIM5-205ENST00000380180 TWNKQ96RR1 684 aa21.1■□□□□ 0.97
PDLIM5-205ENST00000380180 NAP1L3Q99457 506 aaPredicted RBP21.1■□□□□ 0.97
PDLIM5-205ENST00000380180 DDX47Q9H0S4 455 aaKnown RBP21.1■□□□□ 0.97
PDLIM5-205ENST00000380180 HMGXB4Q9UGU5 601 aa21.1■□□□□ 0.97
PDLIM5-205ENST00000380180 RECQL4O94761 1208 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 AKAP5P24588 427 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 CDH5P33151 784 aaPredicted RBP21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 TAF2Q6P1X5 1199 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 APOL6Q9BWW8 343 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 CELF4Q9BZC1 486 aaKnown RBP21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 EPB41L5Q9HCM4 733 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 GTF2IRD1Q9UHL9 959 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 ZSCAN5CA6NGD5 496 aaPredicted RBP21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 PYGMP11217 842 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms