RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 MYBL1P10243 752 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 TCF4P15884 667 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 YBX3P16989 372 aaKnown RBP eCLIP8.47□□□□□ -1.056e-6■□□□□ 10.6
PDLIM5-204ENST00000380176 TBXAS1P24557 533 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 CCT5P48643 541 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 ZNF132P52740 706 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 RPL7AP62424 266 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 MCL1Q07820 350 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 SGO2Q562F6 1265 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 EEF1DP3Q658K8 133 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 PLPPR4Q7Z2D5 763 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 WDR49Q8IV35 697 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 KIF12Q96FN5 646 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 FAM167AQ96KS9 214 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 HEMGNQ9BXL5 484 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 SEMA4AQ9H3S1 761 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 LRRC19Q9H756 370 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 MTUS1Q9ULD2 1270 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 R3HDM2Q9Y2K5 976 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 PLXNA1Q9UIW2 1896 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 GOLGA6L10A6NI86 522 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 INO80B-WBP1J3KQ70 363 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 PODXLO00592 558 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 HOXC6P09630 235 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 PMS2P54278 862 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 TFAMQ00059 246 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 PPIL2Q13356 520 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 MXD4Q14582 209 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 ATP13A4Q4VNC1 1196 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 C9orf131Q5VYM1 1079 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 PLEKHA7Q6IQ23 1121 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 EFCAB12Q6NXP0 572 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 CHRDL2Q6WN34 429 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 SCARA5Q6ZMJ2 495 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 PHF13Q86YI8 300 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 C12orf50Q8NA57 414 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 UHMK1Q8TAS1 419 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 PPP1R16BQ96T49 567 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 INO80BQ9C086 356 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 PTPRHQ9HD43 1115 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 NOVA2Q9UNW9 492 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 CAND2O75155 1236 aa8.46□□□□□ -1.05
PDLIM5-204ENST00000380176 PROZP22891 400 aa8.46□□□□□ -1.05
PDLIM5-204ENST00000380176 LSP1P33241 339 aa8.46□□□□□ -1.05
PDLIM5-204ENST00000380176 GJC1P36383 396 aa8.46□□□□□ -1.05
PDLIM5-204ENST00000380176 IGBP1P78318 339 aa8.46□□□□□ -1.05
PDLIM5-204ENST00000380176 SLC29A2Q14542 456 aa8.46□□□□□ -1.05
PDLIM5-204ENST00000380176 TRIP13Q15645 432 aaPredicted RBP8.46□□□□□ -1.05
PDLIM5-204ENST00000380176 KRT71Q3SY84 523 aa8.46□□□□□ -1.05
PDLIM5-204ENST00000380176 TCP11Q8WWU5 503 aa8.46□□□□□ -1.05
PDLIM5-204ENST00000380176 TFAP2BQ92481 460 aa8.46□□□□□ -1.05
PDLIM5-204ENST00000380176 TRIM11Q96F44 468 aa8.46□□□□□ -1.05
PDLIM5-204ENST00000380176 CISHQ9NSE2 258 aa8.46□□□□□ -1.05
PDLIM5-204ENST00000380176 KLHL11Q9NVR0 708 aa8.46□□□□□ -1.05
PDLIM5-204ENST00000380176 TLR3O15455 904 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 MEFVO15553 781 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 RALAP11233 206 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 FGFR4P22455 802 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 TMOD1P28289 359 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 MDH1P40925 334 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 SLC1A1P43005 524 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 SEC24CP53992 1094 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 KRT17Q04695 432 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 ADCY2Q08462 1091 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 DUOXA2Q1HG44 320 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 ZNF568Q3ZCX4 644 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 ATF7IP2Q5U623 682 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 TSHZ1Q6ZSZ6 1077 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 SRLQ86TD4 932 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 ZBTB8OSQ8IWT0 167 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 WDTC1Q8N5D0 677 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 ART4Q93070 314 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 IMPG2Q9BZV3 1241 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 XYLT2Q9H1B5 865 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 PABPC3Q9H361 631 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 FZD8Q9H461 694 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 POLIQ9UNA4 740 aa8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 RRP15Q9Y3B9 282 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-204ENST00000380176 ECEL1O95672 775 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 ITGBL1O95965 494 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 CXCL8P10145 99 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 MMP8P22894 467 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 ASPAP45381 313 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 FNTAP49354 379 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 MAGOHP61326 146 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 MBTD1Q05BQ5 628 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 IFFO1Q0D2I5 559 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 ZNF252P-AS1Q0IIN9 211 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 PPP1R7Q15435 360 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 LIN9Q5TKA1 542 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 KCNV1Q6PIU1 500 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 MPZL3Q6UWV2 235 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 TRIM72Q6ZMU5 477 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 RUFY4Q6ZNE9 571 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 CCDC50Q8IVM0 306 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 IFT122Q9HBG6 1241 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 SLC12A6Q9UHW9 1150 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 PASKQ96RG2 1323 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 TRIP11Q15643 1979 aa8.45□□□□□ -1.06
PDLIM5-204ENST00000380176 LOC102724159A0A0B4J2E5 919 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms