RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 TOP6BLQ8N6T0 577 aa16.13■□□□□ 0.17
RPP40-202ENST00000380051 C3orf58Q8NDZ4 430 aa16.13■□□□□ 0.17
RPP40-202ENST00000380051 OR8K1Q8NGG5 319 aa16.13■□□□□ 0.17
RPP40-202ENST00000380051 RABGGTAQ92696 567 aa16.13■□□□□ 0.17
RPP40-202ENST00000380051 KAT5Q92993 513 aa16.13■□□□□ 0.17
RPP40-202ENST00000380051 MMS19Q96T76 1030 aa16.13■□□□□ 0.17
RPP40-202ENST00000380051 AJAP1Q9UKB5 411 aaPredicted RBP16.13■□□□□ 0.17
RPP40-202ENST00000380051 POLIQ9UNA4 740 aa16.13■□□□□ 0.17
RPP40-202ENST00000380051 COL4A6Q14031 1691 aa16.13■□□□□ 0.17
RPP40-202ENST00000380051 CYB561D2O14569 222 aa16.12■□□□□ 0.17
RPP40-202ENST00000380051 TRAPPC3O43617 180 aa16.12■□□□□ 0.17
RPP40-202ENST00000380051 TLL1O43897 1013 aa16.12■□□□□ 0.17
RPP40-202ENST00000380051 MFAP3LO75121 409 aa16.12■□□□□ 0.17
RPP40-202ENST00000380051 TACC1O75410 805 aa16.12■□□□□ 0.17
RPP40-202ENST00000380051 LAG3P18627 525 aa16.12■□□□□ 0.17
RPP40-202ENST00000380051 BMP8BP34820 402 aa16.12■□□□□ 0.17
RPP40-202ENST00000380051 ADKP55263 362 aaKnown RBP16.12■□□□□ 0.17
RPP40-202ENST00000380051 PDXDC1Q6P996 788 aa16.12■□□□□ 0.17
RPP40-202ENST00000380051 LIMS2Q7Z4I7 341 aa16.12■□□□□ 0.17
RPP40-202ENST00000380051 FIBCD1Q8N539 461 aa16.12■□□□□ 0.17
RPP40-202ENST00000380051 SHC3Q92529 594 aa16.12■□□□□ 0.17
RPP40-202ENST00000380051 SYN2Q92777 582 aaPredicted RBP16.12■□□□□ 0.17
RPP40-202ENST00000380051 SUSD3Q96L08 255 aa16.12■□□□□ 0.17
RPP40-202ENST00000380051 SENP8Q96LD8 212 aa16.12■□□□□ 0.17
RPP40-202ENST00000380051 AAASQ9NRG9 546 aa16.12■□□□□ 0.17
RPP40-202ENST00000380051 PRG3Q9Y2Y8 225 aaPredicted RBP16.12■□□□□ 0.17
RPP40-202ENST00000380051 LRRC53A6NM62 1247 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 F8VZ95 297 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 M0QZQ0 153 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 FOXN3O00409 490 aaPredicted RBP16.11■□□□□ 0.17
RPP40-202ENST00000380051 KIF4AO95239 1232 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 WEE2P0C1S8 567 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 CCDC172P0C7W6 258 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 ACO1P21399 889 aaKnown RBP16.11■□□□□ 0.17
RPP40-202ENST00000380051 SOX5P35711 763 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 SOWAHAQ2M3V2 549 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 TIGD5Q53EQ6 642 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 SFMBT2Q5VUG0 894 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 KCNT2Q6UVM3 1135 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 CCDC186Q7Z3E2 898 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 UBR7Q8N806 425 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 TC2NQ8N9U0 490 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 APPL2Q8NEU8 664 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 SPATA18Q8TC71 538 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 ZNF558Q96NG5 402 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 GPR88Q9GZN0 384 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 CISHQ9NSE2 258 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 AIPL1Q9NZN9 384 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 HCSTQ9UBK5 93 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 ADAM28Q9UKQ2 775 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 DSEQ9UL01 958 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 CNTN6Q9UQ52 1028 aa16.11■□□□□ 0.17
RPP40-202ENST00000380051 MRPL42Q9Y6G3 142 aaKnown RBP16.11■□□□□ 0.17
RPP40-202ENST00000380051 IGFBP6P24592 240 aaPredicted RBP16.1■□□□□ 0.17
RPP40-202ENST00000380051 HNRNPH3P31942 346 aaKnown RBP16.1■□□□□ 0.17
RPP40-202ENST00000380051 BRCC3P46736 316 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 ELAVL2Q12926 359 aaKnown RBP16.1■□□□□ 0.17
RPP40-202ENST00000380051 SCARA5Q6ZMJ2 495 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 FAM71AQ8IYT1 594 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 TMEM86AQ8N2M4 240 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 PANX2Q96RD6 677 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 DNAJC7Q99615 494 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 ARID3AQ99856 593 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 SDCBP2Q9H190 292 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 SMYD3Q9H7B4 428 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 ABHD10Q9NUJ1 306 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 ZNHIT6Q9NWK9 470 aaKnown RBP16.1■□□□□ 0.17
RPP40-202ENST00000380051 MARCH5Q9NX47 278 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 BARX2Q9UMQ3 279 aaPredicted RBP16.1■□□□□ 0.17
RPP40-202ENST00000380051 PCDHB4Q9Y5E5 795 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 CYP11A1P05108 521 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 ITGB1P05556 798 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 PTMAP06454 111 aaKnown RBP16.1■□□□□ 0.17
RPP40-202ENST00000380051 ODC1P11926 461 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 FERP16591 822 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 TYMPP19971 482 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 WARSP23381 471 aaKnown RBP16.1■□□□□ 0.17
RPP40-202ENST00000380051 CDH8P55286 799 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 INCA1Q0VD86 236 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 UNC93AQ86WB7 457 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 COLGALT1Q8NBJ5 622 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 HASPINQ8TF76 798 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 CLP1Q92989 425 aaKnown RBP16.1■□□□□ 0.17
RPP40-202ENST00000380051 DNAI2Q9GZS0 605 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 PCDHB8Q9UN66 801 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 L1RE1Q9UN81 338 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 PCDHB12Q9Y5F1 795 aa16.1■□□□□ 0.17
RPP40-202ENST00000380051 SF3B1O75533 1304 aaKnown RBP eCLIP16.09■□□□□ 0.17
RPP40-202ENST00000380051 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.09■□□□□ 0.17
RPP40-202ENST00000380051 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.09■□□□□ 0.17
RPP40-202ENST00000380051 NT5C1B-RDH14C9J2C7 533 aa16.09■□□□□ 0.17
RPP40-202ENST00000380051 SYN3O14994 580 aa16.09■□□□□ 0.17
RPP40-202ENST00000380051 CILPO75339 1184 aa16.09■□□□□ 0.17
RPP40-202ENST00000380051 CD58P19256 250 aa16.09■□□□□ 0.17
RPP40-202ENST00000380051 PPM1AP35813 382 aa16.09■□□□□ 0.17
RPP40-202ENST00000380051 USP8P40818 1118 aa16.09■□□□□ 0.17
RPP40-202ENST00000380051 RAP1GAPP47736 663 aa16.09■□□□□ 0.17
RPP40-202ENST00000380051 LHX1P48742 406 aa16.09■□□□□ 0.17
RPP40-202ENST00000380051 BPIFB4P59827 614 aa16.09■□□□□ 0.17
RPP40-202ENST00000380051 GOLGA8FQ08AF8 430 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms