RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 DUOXA2Q1HG44 320 aa16.55■□□□□ 0.24
BRF1-203ENST00000379937 P3H1Q32P28 736 aa16.55■□□□□ 0.24
BRF1-203ENST00000379937 ZNF618Q5T7W0 954 aa16.55■□□□□ 0.24
BRF1-203ENST00000379937 FAM102AQ5T9C2 384 aaPredicted RBP16.55■□□□□ 0.24
BRF1-203ENST00000379937 TMC3Q7Z5M5 1100 aa16.55■□□□□ 0.24
BRF1-203ENST00000379937 TMPRSS4Q9NRS4 437 aa16.55■□□□□ 0.24
BRF1-203ENST00000379937 STXBP5LQ9Y2K9 1186 aa16.55■□□□□ 0.24
BRF1-203ENST00000379937 PCDHB2Q9Y5E7 798 aa16.55■□□□□ 0.24
BRF1-203ENST00000379937 GH1P01241 217 aa16.54■□□□□ 0.24
BRF1-203ENST00000379937 CATSPER4Q7RTX7 472 aa16.54■□□□□ 0.24
BRF1-203ENST00000379937 DHX33Q9H6R0 707 aaKnown RBP16.54■□□□□ 0.24
BRF1-203ENST00000379937 ITGBL1O95965 494 aaPredicted RBP16.54■□□□□ 0.24
BRF1-203ENST00000379937 TNNC2P02585 160 aa16.54■□□□□ 0.24
BRF1-203ENST00000379937 CLTAP09496 248 aa16.54■□□□□ 0.24
BRF1-203ENST00000379937 LCP1P13796 627 aa16.54■□□□□ 0.24
BRF1-203ENST00000379937 PRLRP16471 622 aa16.54■□□□□ 0.24
BRF1-203ENST00000379937 COILP38432 576 aaPredicted RBP16.54■□□□□ 0.24
BRF1-203ENST00000379937 TMED2Q15363 201 aa16.54■□□□□ 0.24
BRF1-203ENST00000379937 ACTRT1Q8TDG2 376 aa16.54■□□□□ 0.24
BRF1-203ENST00000379937 ATP6V1G3Q96LB4 118 aa16.54■□□□□ 0.24
BRF1-203ENST00000379937 MEIS3P2A8K0S8 358 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 BTBD19C9JJ37 291 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 H3BRB1 525 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 LSP1P33241 339 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 SPNS2Q8IVW8 549 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 IQCKQ8N0W5 287 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 DNAJB3Q8WWF6 145 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 DDX1Q92499 740 aaKnown RBP16.53■□□□□ 0.24
BRF1-203ENST00000379937 TUT1Q9H6E5 874 aaKnown RBP16.53■□□□□ 0.24
BRF1-203ENST00000379937 A0A0B4J269 797 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 EIF4E1BA6NMX2 242 aaKnown RBP16.53■□□□□ 0.24
BRF1-203ENST00000379937 MYL3P08590 195 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 MAP3K10Q02779 954 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 MAMLD1Q13495 774 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 ZNF667Q5HYK9 610 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 LIN9Q5TKA1 542 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 PRMT1Q99873 361 aaKnown RBP16.53■□□□□ 0.24
BRF1-203ENST00000379937 EIF2AQ9BY44 585 aaKnown RBP16.53■□□□□ 0.24
BRF1-203ENST00000379937 OSBPL8Q9BZF1 889 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 MAFBQ9Y5Q3 323 aaPredicted RBP16.53■□□□□ 0.24
BRF1-203ENST00000379937 ADCY6O43306 1168 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 AVILO75366 819 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 AFF1P51825 1210 aaKnown RBP16.53■□□□□ 0.24
BRF1-203ENST00000379937 FAM133BQ5BKY9 247 aaKnown RBP16.53■□□□□ 0.24
BRF1-203ENST00000379937 SLC9A9Q8IVB4 645 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 CLEC4CQ8WTT0 213 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 MFSD14AQ96MC6 490 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 CDT1Q9H211 546 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 RNF39Q9H2S5 420 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 SAYSD1Q9NPB0 183 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 ANAPC5Q9UJX4 755 aa16.53■□□□□ 0.24
BRF1-203ENST00000379937 ZNF831Q5JPB2 1677 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 GRIN3BO60391 1043 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 PLA2G6O60733 806 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 TOM1L1O75674 476 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 NEFHP12036 1026 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 ARF4P18085 180 aaPredicted RBP16.52■□□□□ 0.24
BRF1-203ENST00000379937 NAMPTP43490 491 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 TTLL4Q14679 1199 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 SAMD3Q8N6K7 520 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 CPXM1Q96SM3 734 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 CYTH4Q9UIA0 394 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 INPP5FQ9Y2H2 1132 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 MYO18AQ92614 2054 aaKnown RBP16.52■□□□□ 0.24
BRF1-203ENST00000379937 UBE4BO95155 1302 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 KIAA0391O15091 583 aaKnown RBP16.52■□□□□ 0.24
BRF1-203ENST00000379937 MSCO60682 206 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 LGALS2P05162 132 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 ATF2P15336 505 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 RFX6Q8HWS3 928 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 CCDC13Q8IYE1 715 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 UPF1Q92900 1129 aaKnown RBP eCLIP16.52■□□□□ 0.243e-7■■■■■ 30.9
BRF1-203ENST00000379937 LRRC45Q96CN5 670 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 ZFP42Q96MM3 310 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 CFAP57Q96MR6 1250 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 ELAC2Q9BQ52 826 aaKnown RBP16.52■□□□□ 0.24
BRF1-203ENST00000379937 RAB17Q9H0T7 212 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 NXF3Q9H4D5 531 aaKnown RBP16.52■□□□□ 0.24
BRF1-203ENST00000379937 IL1RAPL1Q9NZN1 696 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 RASAL2Q9UJF2 1139 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 NUDT5Q9UKK9 219 aa16.52■□□□□ 0.24
BRF1-203ENST00000379937 PIN4Q9Y237 131 aaKnown RBP16.52■□□□□ 0.24
BRF1-203ENST00000379937 DNAH14Q0VDD8 3507 aa16.52■□□□□ 0.23
BRF1-203ENST00000379937 ARSEP51690 589 aa16.52■□□□□ 0.23
BRF1-203ENST00000379937 BBS9Q3SYG4 887 aa16.52■□□□□ 0.23
BRF1-203ENST00000379937 CELF3Q5SZQ8 465 aaKnown RBP16.52■□□□□ 0.23
BRF1-203ENST00000379937 SDCBP2Q9H190 292 aa16.52■□□□□ 0.23
BRF1-203ENST00000379937 CWC15Q9P013 229 aaKnown RBP16.52■□□□□ 0.23
BRF1-203ENST00000379937 SEPT10Q9P0V9 454 aa16.52■□□□□ 0.23
BRF1-203ENST00000379937 LRRC37AA6NMS7 1700 aa16.52■□□□□ 0.23
BRF1-203ENST00000379937 CHST13Q8NET6 341 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 ANKRD36BP1Q96IX9 119 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 ACO2Q99798 780 aaKnown RBP16.51■□□□□ 0.23
BRF1-203ENST00000379937 CARD9Q9H257 536 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 CST8O60676 142 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 STAM2O75886 525 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 PGK1P00558 417 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 CHN1P15882 459 aa16.51■□□□□ 0.23
BRF1-203ENST00000379937 TFE3P19532 575 aaPredicted RBP16.51■□□□□ 0.23
BRF1-203ENST00000379937 PEX5P50542 639 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms