RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 RBM15BQ8NDT2 890 aaKnown RBP11.5□□□□□ -0.57
USP6NL-202ENST00000379237 APOL6Q9BWW8 343 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 MRPS26Q9BYN8 205 aaKnown RBP11.5□□□□□ -0.57
USP6NL-202ENST00000379237 TRPV6Q9H1D0 765 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 TRPC5Q9UL62 973 aaPredicted RBP11.5□□□□□ -0.57
USP6NL-202ENST00000379237 TNRQ92752 1358 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 FAM237BA0A1B0GVD1 139 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 CYP26A1O43174 497 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 CAMTA2O94983 1202 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 TPD52P55327 224 aaPredicted RBP11.5□□□□□ -0.57
USP6NL-202ENST00000379237 SLC25A3Q00325 362 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 KBTBD2Q8IY47 623 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 NUP93Q8N1F7 819 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 HAPLN3Q96S86 360 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 AGPAT1Q99943 283 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 SOX13Q9UN79 622 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 USP31Q70CQ4 1352 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 TFPTP0C1Z6 253 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 TMEM63BQ5T3F8 832 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 IRF2BP2Q7Z5L9 587 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 FRMD5Q7Z6J6 570 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 TTC7BQ86TV6 843 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 SCAIQ8N9R8 606 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 FNDC8Q8TC99 324 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 C10orf88Q9H8K7 445 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 SH3GLB2Q9NR46 395 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 ATAD3AQ9NVI7 634 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 EPS15L1Q9UBC2 864 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 ACTL7BQ9Y614 415 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 PPLO60437 1756 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 ALKQ9UM73 1620 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 ADGRA3Q8IWK6 1321 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 F8W8V4 182 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 AQP5P55064 265 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 CYP4A11Q02928 519 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 OCA2Q04671 838 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 TTLL12Q14166 644 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-202ENST00000379237 TTC27Q6P3X3 843 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 KRT27Q7Z3Y8 459 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 ALYREFQ86V81 257 aaKnown RBP11.49□□□□□ -0.57
USP6NL-202ENST00000379237 DEPTORQ8TB45 409 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 RSAD2Q8WXG1 361 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 NMUR2Q9GZQ4 415 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 LIN28AQ9H9Z2 209 aaKnown RBP11.49□□□□□ -0.57
USP6NL-202ENST00000379237 ZNF229Q9UJW7 825 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 INPP5FQ9Y2H2 1132 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 PREX1Q8TCU6 1659 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 GOLGA8TH3BQL2 631 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 FBP2O00757 339 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 PIAS1O75925 651 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 TRIM49P0CI25 452 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 TRIM49CP0CI26 452 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 CD97P48960 835 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 ARSEP51690 589 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 COPAP53621 1224 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 ITGADQ13349 1161 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 KNOP1Q1ED39 458 aaKnown RBP11.49□□□□□ -0.57
USP6NL-202ENST00000379237 EFCAB3Q8N7B9 438 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 TSPAN18Q96SJ8 248 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 KIAA1586Q9HCI6 787 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 MRGBPQ9NV56 204 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 RAB20Q9NX57 234 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 ARHGAP26Q9UNA1 814 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 PRELID1Q9Y255 219 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 FADS3Q9Y5Q0 445 aa11.49□□□□□ -0.57
USP6NL-202ENST00000379237 IPO5O00410 1097 aaKnown RBP11.48□□□□□ -0.57
USP6NL-202ENST00000379237 CYP1A1P04798 512 aaPredicted RBP11.48□□□□□ -0.57
USP6NL-202ENST00000379237 KLHL38Q2WGJ6 581 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 SYDE1Q6ZW31 735 aaPredicted RBP11.48□□□□□ -0.57
USP6NL-202ENST00000379237 TRABD2AQ86V40 505 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 SEPT12Q8IYM1 358 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 ZNF398Q8TD17 642 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 DCAF5Q96JK2 942 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 GCP02774 474 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 T-ENOLP0DO92 83 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 ALDH1A3P47895 512 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 GRB10Q13322 594 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 NXNQ6DKJ4 435 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 PALB2Q86YC2 1186 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 TMEM260Q9NX78 707 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 DAPK2Q9UIK4 370 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 ZMYM2Q9UBW7 1377 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 C1orf232A0A0U1RR37 186 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 ZNF862O60290 1169 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 TDP2O95551 362 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 POLR2MP0CAP2 368 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 TMEM214Q6NUQ4 689 aaKnown RBP11.48□□□□□ -0.57
USP6NL-202ENST00000379237 PASD1Q8IV76 773 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 PDZD8Q8NEN9 1154 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 NGLY1Q96IV0 654 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 KCNK16Q96T55 309 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 GPATCH1Q9BRR8 931 aaKnown RBP11.48□□□□□ -0.57
USP6NL-202ENST00000379237 OXCT2Q9BYC2 517 aaPredicted RBP11.48□□□□□ -0.57
USP6NL-202ENST00000379237 DNAJC18Q9H819 358 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 S100A14Q9HCY8 104 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 GPCPD1Q9NPB8 672 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 TTLL13PA6NNM8 815 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 ZBBXA8MT70 800 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 H3BSA7 217 aa11.48□□□□□ -0.57
USP6NL-202ENST00000379237 ATP9BO43861 1147 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms