RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 CES2O00748 559 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 CTSHP09668 335 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 RAD23BP54727 409 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 CCDC181Q5TID7 509 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 RPAINQ86UA6 219 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 RSPH3Q86UC2 560 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 PDCL2Q8N4E4 241 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 PCSK9Q8NBP7 692 aaKnown RBP18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 UVRAGQ9P2Y5 699 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 RNF14Q9UBS8 474 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 HMGXB4Q9UGU5 601 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 IPPQ9Y573 584 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 ALG6Q9Y672 507 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 PPEF2O14830 753 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 DDX3YO15523 660 aaKnown RBP18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 RRM1P23921 792 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 MGAT3Q09327 533 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 CFAP221Q4G0U5 840 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 LLGL2Q6P1M3 1020 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 PHF13Q86YI8 300 aaPredicted RBP18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 BTBD6Q96KE9 485 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 TWNKQ96RR1 684 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 PNKPQ96T60 521 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 CYP3A43Q9HB55 503 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 AVENQ9NQS1 362 aaPredicted RBP18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 KLK14Q9P0G3 267 aa18.5■□□□□ 0.55
THUMPD2-201ENST00000378727 CILPO75339 1184 aa18.49■□□□□ 0.55
THUMPD2-201ENST00000378727 GNRH1P01148 92 aa18.49■□□□□ 0.55
THUMPD2-201ENST00000378727 PAFAH1B1P43034 410 aa18.49■□□□□ 0.55
THUMPD2-201ENST00000378727 BRCA2P51587 3418 aa18.49■□□□□ 0.55
THUMPD2-201ENST00000378727 PTP4A2Q12974 167 aa18.49■□□□□ 0.55
THUMPD2-201ENST00000378727 PTGISQ16647 500 aa18.49■□□□□ 0.55
THUMPD2-201ENST00000378727 XKR4Q5GH76 650 aa18.49■□□□□ 0.55
THUMPD2-201ENST00000378727 ARRDC4Q8NCT1 418 aa18.49■□□□□ 0.55
THUMPD2-201ENST00000378727 PBKQ96KB5 322 aa18.49■□□□□ 0.55
THUMPD2-201ENST00000378727 C11orf70Q9BRQ4 267 aa18.49■□□□□ 0.55
THUMPD2-201ENST00000378727 OSBPL7Q9BZF2 842 aa18.49■□□□□ 0.55
THUMPD2-201ENST00000378727 ELOVL4Q9GZR5 314 aa18.49■□□□□ 0.55
THUMPD2-201ENST00000378727 ST3GAL5Q9UNP4 418 aa18.49■□□□□ 0.55
THUMPD2-201ENST00000378727 SMIM28A0A1B0GU29 152 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 TMEM110-MUSTN1A8MSY1 372 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 MYBL1P10243 752 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 ORC1Q13415 861 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 MESDQ14696 234 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 TWF2Q6IBS0 349 aaKnown RBP18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 PHLDB2Q86SQ0 1253 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 CPNE8Q86YQ8 564 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 SLC4A11Q8NBS3 891 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 PARP2Q9UGN5 583 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 PCDHGC3Q9UN70 934 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 RPS6KA5O75582 802 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 P4HA1P13674 534 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 CLCN6P51797 869 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 ACLYP53396 1101 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 DCAF12L1Q5VU92 463 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 MMS22LQ6ZRQ5 1243 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 RNF180Q86T96 592 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 MMGT1Q8N4V1 131 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 BEST2Q8NFU1 509 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 TRIM11Q96F44 468 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 RBM12Q9NTZ6 932 aaKnown RBP18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 RNF216Q9NWF9 866 aaPredicted RBP18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 ADAM22Q9P0K1 906 aa18.48■□□□□ 0.55
THUMPD2-201ENST00000378727 LSM8O95777 96 aaKnown RBP18.47■□□□□ 0.55
THUMPD2-201ENST00000378727 INHAP05111 366 aa18.47■□□□□ 0.55
THUMPD2-201ENST00000378727 PAEPP09466 180 aa18.47■□□□□ 0.55
THUMPD2-201ENST00000378727 COMTP21964 271 aa18.47■□□□□ 0.55
THUMPD2-201ENST00000378727 RNASE9P60153 205 aaKnown RBP18.47■□□□□ 0.55
THUMPD2-201ENST00000378727 ITGA7Q13683 1181 aa18.47■□□□□ 0.55
THUMPD2-201ENST00000378727 WDTC1Q8N5D0 677 aa18.47■□□□□ 0.55
THUMPD2-201ENST00000378727 ZNF296Q8WUU4 475 aaPredicted RBP18.47■□□□□ 0.55
THUMPD2-201ENST00000378727 VCPIP1Q96JH7 1222 aa18.47■□□□□ 0.55
THUMPD2-201ENST00000378727 TRIM7Q9C029 511 aa18.47■□□□□ 0.55
THUMPD2-201ENST00000378727 UBQLN1Q9UMX0 589 aaKnown RBP18.47■□□□□ 0.55
THUMPD2-201ENST00000378727 CEP104O60308 925 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 KCNE1P15382 129 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 MMP8P22894 467 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 CDH5P33151 784 aaPredicted RBP18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 THPOP40225 353 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 TNNC1P63316 161 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 C1QBPQ07021 282 aaKnown RBP18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 INCA1Q0VD86 236 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 MYO1EQ12965 1108 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 NFX1Q12986 1120 aaKnown RBP18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 C9orf57Q5W0N0 161 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 C1orf131Q8NDD1 294 aaKnown RBP18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 ACTRT1Q8TDG2 376 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 ALG3Q92685 438 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 RPS6KC1Q96S38 1066 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 AGO3Q9H9G7 860 aaKnown RBP18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 TRMT13Q9NUP7 481 aaKnown RBP18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 RAB21Q9UL25 225 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 FRMPD3Q5JV73 1810 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 FKTNO75072 461 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 CD19P15391 556 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 LHX8Q68G74 356 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 RASGEF1CQ8N431 466 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 USP38Q8NB14 1042 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 KRT35Q92764 455 aa18.46■□□□□ 0.55
THUMPD2-201ENST00000378727 CD101Q93033 1021 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms