RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 TMEM119Q4V9L6 283 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 EFCAB12Q6NXP0 572 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 ANO5Q75V66 913 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 PPIL6Q8IXY8 311 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 FBXO25Q8TCJ0 367 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 SP110Q9HB58 689 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 CYTH3O43739 400 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 GRAP2O75791 330 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 GPD1P21695 349 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 STIP1P31948 543 aaKnown RBP11.84□□□□□ -0.51
RPGR-203ENST00000378505 PSMC6P62333 389 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 PTK7Q13308 1070 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 MEA1Q16626 185 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 UGP2Q16851 508 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 C4orf22Q6V702 233 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 RGS9BPQ6ZS82 235 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 C4orf19Q8IY42 314 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 C1orf131Q8NDD1 294 aaKnown RBP11.84□□□□□ -0.51
RPGR-203ENST00000378505 MYCBPAPQ8TBZ2 947 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 PLEKHA5Q9HAU0 1116 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 OSGEPQ9NPF4 335 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 BLOC1S4Q9NUP1 217 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 L3MBTL1Q9Y468 752 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 BNIP3LO60238 219 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 PDHA1P08559 390 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 RARBP10826 455 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 ACADSBP45954 432 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 SULT1E1P49888 294 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 PHEXP78562 749 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 SMAD1Q15797 465 aaKnown RBP11.84□□□□□ -0.51
RPGR-203ENST00000378505 RABGAP1LQ5R372 815 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 PRAMEF18Q5VWM3 479 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 MDM1Q8TC05 714 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 ZNF507Q8TCN5 953 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 CAVIN3Q969G5 261 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 NRBF2Q96F24 287 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 AGAP3Q96P47 875 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 PDGFRBP09619 1106 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 EFTUD2Q15029 972 aaKnown RBP eCLIP11.84□□□□□ -0.51
RPGR-203ENST00000378505 SMTNL2Q2TAL5 461 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 SYCP2LQ5T4T6 812 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 BTNL9Q6UXG8 535 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 URGCPQ8TCY9 931 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 SLC26A7Q8TE54 656 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 KRT35Q92764 455 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 HPDLQ96IR7 371 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 ADA2Q9NZK5 511 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 SLC8A2Q9UPR5 921 aa11.84□□□□□ -0.51
RPGR-203ENST00000378505 DYNC1LI2O43237 492 aaPredicted RBP11.83□□□□□ -0.51
RPGR-203ENST00000378505 DNAJC8O75937 253 aaPredicted RBP11.83□□□□□ -0.51
RPGR-203ENST00000378505 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.83□□□□□ -0.51
RPGR-203ENST00000378505 TAS1R2Q8TE23 839 aa11.83□□□□□ -0.51
RPGR-203ENST00000378505 PDCD6IPQ8WUM4 868 aaKnown RBP11.83□□□□□ -0.51
RPGR-203ENST00000378505 CCDC124Q96CT7 223 aaKnown RBP11.83□□□□□ -0.51
RPGR-203ENST00000378505 FAM167BQ9BTA0 163 aa11.83□□□□□ -0.51
RPGR-203ENST00000378505 SPON2Q9BUD6 331 aa11.83□□□□□ -0.51
RPGR-203ENST00000378505 SCAF8Q9UPN6 1271 aaKnown RBP11.83□□□□□ -0.51
RPGR-203ENST00000378505 H3BQF6 201 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 GLI1P08151 1106 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 NAMPTP43490 491 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 KDSRQ06136 332 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 HIC1Q14526 733 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 FRA10AC1Q70Z53 315 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 SAMD7Q7Z3H4 446 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 ATXN7L3BQ96GX2 97 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 FAM49BQ9NUQ9 324 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 ABT1Q9ULW3 272 aaKnown RBP11.83□□□□□ -0.52
RPGR-203ENST00000378505 PSMD3O43242 534 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 NUDT12Q9BQG2 462 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 TLR10Q9BXR5 811 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 TMBIM4Q9HC24 238 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 PFDN1O60925 122 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 PDK1Q15118 436 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 MAPRE2Q15555 327 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 SV2AQ7L0J3 742 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 AFG1LQ8WV93 481 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 CLMNQ96JQ2 1002 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 GCNAQ96QF7 691 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 KLF6Q99612 283 aaPredicted RBP11.83□□□□□ -0.52
RPGR-203ENST00000378505 WHRNQ9P202 907 aa11.83□□□□□ -0.52
RPGR-203ENST00000378505 IQCA1LA6NCM1 817 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 DPEP1P16444 411 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 RRM1P23921 792 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 DNAL1Q4LDG9 190 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 LVRNQ6Q4G3 990 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 RNF135Q8IUD6 432 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 SLC35C1Q96A29 364 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 PDCD2LQ9BRP1 358 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 MTO1Q9Y2Z2 717 aaKnown RBP11.82□□□□□ -0.52
RPGR-203ENST00000378505 COL5A2P05997 1499 aaPredicted RBP11.82□□□□□ -0.52
RPGR-203ENST00000378505 MAPTP10636 758 aaKnown RBP11.82□□□□□ -0.52
RPGR-203ENST00000378505 TCF7P36402 384 aaPredicted RBP11.82□□□□□ -0.52
RPGR-203ENST00000378505 NSUN2Q08J23 767 aaKnown RBP eCLIP11.82□□□□□ -0.52
RPGR-203ENST00000378505 PCNX4Q63HM2 1172 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 LRRC43Q8N309 656 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 UBA3Q8TBC4 463 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 ATG4AQ8WYN0 398 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 TSPYL2Q9H2G4 693 aaPredicted RBP11.82□□□□□ -0.52
RPGR-203ENST00000378505 DFFAO00273 331 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 SUPT20HL2P0C7V6 817 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms