RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ZNF606Q8WXB4 792 aa8.59□□□□□ -1.03
CKAP2-203ENST00000378037 CFAP36Q96G28 342 aa8.59□□□□□ -1.03
CKAP2-203ENST00000378037 FAM193BQ96PV7 902 aaPredicted RBP8.59□□□□□ -1.03
CKAP2-203ENST00000378037 PLCD4Q9BRC7 762 aa8.59□□□□□ -1.03
CKAP2-203ENST00000378037 TINF2Q9BSI4 451 aa8.59□□□□□ -1.03
CKAP2-203ENST00000378037 TMEM121Q9BTD3 319 aa8.59□□□□□ -1.03
CKAP2-203ENST00000378037 GPR25O00155 361 aa8.59□□□□□ -1.04
CKAP2-203ENST00000378037 ADCY3O60266 1144 aa8.59□□□□□ -1.04
CKAP2-203ENST00000378037 HBP1O60381 514 aa8.59□□□□□ -1.04
CKAP2-203ENST00000378037 RPS6KA5O75582 802 aa8.59□□□□□ -1.04
CKAP2-203ENST00000378037 ARF4P18085 180 aaPredicted RBP8.59□□□□□ -1.04
CKAP2-203ENST00000378037 ACO1P21399 889 aaKnown RBP8.59□□□□□ -1.04
CKAP2-203ENST00000378037 LIG3P49916 1009 aa8.59□□□□□ -1.04
CKAP2-203ENST00000378037 GTF2A2P52657 109 aa8.59□□□□□ -1.04
CKAP2-203ENST00000378037 KIF22Q14807 665 aa8.59□□□□□ -1.04
CKAP2-203ENST00000378037 DCAF6Q58WW2 860 aa8.59□□□□□ -1.04
CKAP2-203ENST00000378037 SRRM1Q8IYB3 904 aaKnown RBP8.59□□□□□ -1.04
CKAP2-203ENST00000378037 TSEN2Q8NCE0 465 aaKnown RBP8.59□□□□□ -1.04
CKAP2-203ENST00000378037 CASKIN2Q8WXE0 1202 aa8.59□□□□□ -1.04
CKAP2-203ENST00000378037 ANKRD7Q92527 254 aa8.59□□□□□ -1.04
CKAP2-203ENST00000378037 EIF2AQ9BY44 585 aaKnown RBP8.59□□□□□ -1.04
CKAP2-203ENST00000378037 GCOM2Q9BZD3 368 aaPredicted RBP8.59□□□□□ -1.04
CKAP2-203ENST00000378037 UBP1Q9NZI7 540 aa8.59□□□□□ -1.04
CKAP2-203ENST00000378037 COG5Q9UP83 839 aa8.59□□□□□ -1.04
CKAP2-203ENST00000378037 PCDHA2Q9Y5H9 948 aa8.59□□□□□ -1.04
CKAP2-203ENST00000378037 SSU72P8A0A1W2PR75 194 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 SPDYE5A6NIY4 337 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 ZBBXA8MT70 800 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 SPATA31C2B4DYI2 1134 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 FLT3P36888 993 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 MAGOHP61326 146 aaKnown RBP8.58□□□□□ -1.04
CKAP2-203ENST00000378037 KRT17Q04695 432 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 CELF3Q5SZQ8 465 aaKnown RBP8.58□□□□□ -1.04
CKAP2-203ENST00000378037 PPP1R14CQ8TAE6 165 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 TCP11Q8WWU5 503 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 B3GALT6Q96L58 329 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.58□□□□□ -1.04
CKAP2-203ENST00000378037 RNF39Q9H2S5 420 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 ERVK-5Q9HDB9 667 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 SAYSD1Q9NPB0 183 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 CHST7Q9NS84 486 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 MEIS3P2A8K0S8 358 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 OGTO15294 1046 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 PRPSAP2O60256 369 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 SLC25A27O95847 323 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 RDXP35241 583 aaKnown RBP8.58□□□□□ -1.04
CKAP2-203ENST00000378037 OR1G1P47890 313 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 NDST1P52848 882 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 CCL23P55773 120 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 MYO1EQ12965 1108 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 SLC39A4Q6P5W5 647 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 RIOX2Q8IUF8 465 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 HACE1Q8IYU2 909 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 SIX6OS1Q8N1H7 587 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 GPR20Q99678 358 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 COMMD10Q9Y6G5 202 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 NUMA1Q14980 2115 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 MYPNQ86TC9 1320 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 MYH15Q9Y2K3 1946 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 SLC16A3O15427 465 aaKnown RBP8.58□□□□□ -1.04
CKAP2-203ENST00000378037 OPA1O60313 960 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 HUS1O60921 280 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 RECQL4O94761 1208 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 TUBB4AP04350 444 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 SMPD1P17405 629 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 MLH1P40692 756 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 ABCG1P45844 678 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 C4orf50Q6ZRC1 276 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 MAP4K3Q8IVH8 894 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 NPLOC4Q8TAT6 608 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 ZNF516Q92618 1163 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 FAM167AQ96KS9 214 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 CDT1Q9H211 546 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 SUDS3Q9H7L9 328 aaPredicted RBP8.58□□□□□ -1.04
CKAP2-203ENST00000378037 TUBGCP4Q9UGJ1 667 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 ANAPC5Q9UJX4 755 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 FIS1Q9Y3D6 152 aa8.58□□□□□ -1.04
CKAP2-203ENST00000378037 CCDC66A2RUB6 948 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 CST8O60676 142 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 EDN1P05305 212 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 MAPTP10636 758 aaKnown RBP8.57□□□□□ -1.04
CKAP2-203ENST00000378037 P4HA1P13674 534 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 NAMPTP43490 491 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 ATXN1P54253 815 aaKnown RBP8.57□□□□□ -1.04
CKAP2-203ENST00000378037 MXD4Q14582 209 aaPredicted RBP8.57□□□□□ -1.04
CKAP2-203ENST00000378037 SH3PXD2AQ5TCZ1 1133 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 IER5Q5VY09 327 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 KIAA1841Q6NSI8 718 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 FOXR1Q6PIV2 292 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.57□□□□□ -1.04
CKAP2-203ENST00000378037 MIB1Q86YT6 1006 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 DEPDC1BQ8WUY9 529 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 ZIM3Q96PE6 472 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 FUT8Q9BYC5 575 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 CXCL16Q9H2A7 254 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 APOBEC3GQ9HC16 384 aaKnown RBP8.57□□□□□ -1.04
CKAP2-203ENST00000378037 DPP3Q9NY33 737 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 PLIN4Q96Q06 1357 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 H0YCG3 227 aa8.57□□□□□ -1.04
CKAP2-203ENST00000378037 TULP2O00295 520 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms