RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 KCNK9Q9NPC2 374 aa14.67□□□□□ -0.06
SF1-205ENST00000377394 PXMP2Q9NR77 195 aa14.67□□□□□ -0.06
SF1-205ENST00000377394 R3HDM2Q9Y2K5 976 aaKnown RBP14.67□□□□□ -0.06
SF1-205ENST00000377394 NEU2Q9Y3R4 380 aa14.67□□□□□ -0.06
SF1-205ENST00000377394 STBD1O95210 358 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 TTC4O95801 387 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 ITGA8P53708 1063 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 SEPT14Q6ZU15 432 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 FAM47EQ6ZV65 393 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 PHLDB2Q86SQ0 1253 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 GPD1LQ8N335 351 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 SAMD3Q8N6K7 520 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 CPA5Q8WXQ8 436 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 DNAJC9Q8WXX5 260 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 CTNNAL1Q9UBT7 734 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 HAO1Q9UJM8 370 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 ZNF862O60290 1169 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 SLC1A1P43005 524 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 TRIP13Q15645 432 aaPredicted RBP14.66□□□□□ -0.06
SF1-205ENST00000377394 SGSM1Q2NKQ1 1148 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 MTMR14Q8NCE2 650 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 ASAP3Q8TDY4 903 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 PPP1R12CQ9BZL4 782 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 MYLK2Q9H1R3 596 aa14.66□□□□□ -0.06
SF1-205ENST00000377394 ZC3H11AO75152 810 aaKnown RBP eCLIP14.65□□□□□ -0.065e-9■■■□□ 15
SF1-205ENST00000377394 MAN1A1P33908 653 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 ENPEPQ07075 957 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 KLF1Q13351 362 aaPredicted RBP14.65□□□□□ -0.06
SF1-205ENST00000377394 KYNUQ16719 465 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 C2CD6Q53TS8 623 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 DAB2IPQ5VWQ8 1189 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 TAS1R3Q7RTX0 852 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 USP37Q86T82 979 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 FAM81AQ8TBF8 368 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 MAIP1Q8WWC4 291 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 LPAR1Q92633 364 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 FAM81BQ96LP2 452 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 FAM213AQ9BRX8 229 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 C17orf75Q9HAS0 396 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 TCEAL9Q9UHQ7 104 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 RGPD3A6NKT7 1758 aaPredicted RBP14.65□□□□□ -0.06
SF1-205ENST00000377394 RGPD4Q7Z3J3 1758 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 TESPA1A2RU30 521 aaPredicted RBP14.65□□□□□ -0.06
SF1-205ENST00000377394 O00370 1275 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 CYP1A1P04798 512 aaPredicted RBP14.65□□□□□ -0.06
SF1-205ENST00000377394 GARTP22102 1010 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 KLHL23Q8NBE8 558 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 ANKRD27Q96NW4 1050 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 PDLIM7Q9NR12 457 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 DNAJC17Q9NVM6 304 aaKnown RBP14.65□□□□□ -0.06
SF1-205ENST00000377394 PCDHA10Q9Y5I2 948 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 UMODL1Q5DID0 1318 aa14.65□□□□□ -0.06
SF1-205ENST00000377394 SORBS3O60504 671 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 TCEA3O75764 348 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 EPHB2P29323 1055 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 CENPCQ03188 943 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 PTP4A2Q12974 167 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 BRDTQ58F21 947 aaPredicted RBP14.64□□□□□ -0.07
SF1-205ENST00000377394 MON1BQ7L1V2 547 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 ZNF677Q86XU0 584 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 RDM1Q8NG50 284 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 ATL2Q8NHH9 583 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 IFT43Q96FT9 208 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 ZBED3Q96IU2 234 aaPredicted RBP14.64□□□□□ -0.07
SF1-205ENST00000377394 CEP170P1Q96L14 293 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 PWWP2AQ96N64 755 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 RAB3IPQ96QF0 476 aaPredicted RBP14.64□□□□□ -0.07
SF1-205ENST00000377394 TGS1Q96RS0 853 aaKnown RBP14.64□□□□□ -0.07
SF1-205ENST00000377394 SENP7Q9BQF6 1050 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 NINJ2Q9NZG7 142 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 PCDHB2Q9Y5E7 798 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 HNRNPDLO14979 420 aaKnown RBP14.64□□□□□ -0.07
SF1-205ENST00000377394 PROSCO94903 275 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 GAS8O95995 478 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 CLDN10P78369 228 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 CAV1Q03135 178 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 MUM1Q2TAK8 710 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 CCNJLQ8IV13 435 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 GRK7Q8WTQ7 553 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 FAM136AQ96C01 138 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 TRAIPQ9BWF2 469 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 KIAA1683Q9H0B3 1180 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 XPNPEP1Q9NQW7 623 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 C1orf112Q9NSG2 853 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 KLHL14Q9P2G3 628 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 GABBR1Q9UBS5 961 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 SCAF8Q9UPN6 1271 aaKnown RBP14.64□□□□□ -0.07
SF1-205ENST00000377394 TELO2Q9Y4R8 837 aa14.64□□□□□ -0.07
SF1-205ENST00000377394 RALAP11233 206 aa14.63□□□□□ -0.07
SF1-205ENST00000377394 ATF2P15336 505 aa14.63□□□□□ -0.07
SF1-205ENST00000377394 WNT7BP56706 349 aa14.63□□□□□ -0.07
SF1-205ENST00000377394 ARHGEF16Q5VV41 709 aa14.63□□□□□ -0.07
SF1-205ENST00000377394 LMBRD2Q68DH5 695 aaPredicted RBP14.63□□□□□ -0.07
SF1-205ENST00000377394 VSIG1Q86XK7 387 aa14.63□□□□□ -0.07
SF1-205ENST00000377394 LARGE2Q8N3Y3 721 aa14.63□□□□□ -0.07
SF1-205ENST00000377394 ERP27Q96DN0 273 aa14.63□□□□□ -0.07
SF1-205ENST00000377394 TRIM11Q96F44 468 aa14.63□□□□□ -0.07
SF1-205ENST00000377394 FGD4Q96M96 766 aa14.63□□□□□ -0.07
SF1-205ENST00000377394 HEMGNQ9BXL5 484 aa14.63□□□□□ -0.07
SF1-205ENST00000377394 ZNF277Q9NRM2 450 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms