RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 CYP3A43Q9HB55 503 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 NOC2LQ9Y3T9 749 aaKnown RBP18.84■□□□□ 0.61
CTTN-203ENST00000376561 CEP104O60308 925 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 RNASE9P60153 205 aaKnown RBP18.84■□□□□ 0.61
CTTN-203ENST00000376561 C2CD6Q53TS8 623 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 PPP1R2P3Q6NXS1 205 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 SESTD1Q86VW0 696 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 ACTRT1Q8TDG2 376 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 TFAP2BQ92481 460 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 VCPIP1Q96JH7 1222 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 C11orf70Q9BRQ4 267 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 RBM12Q9NTZ6 932 aaKnown RBP18.84■□□□□ 0.61
CTTN-203ENST00000376561 ADAM22Q9P0K1 906 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 TRPV2Q9Y5S1 764 aa18.84■□□□□ 0.61
CTTN-203ENST00000376561 TMEM110-MUSTN1A8MSY1 372 aa18.83■□□□□ 0.6
CTTN-203ENST00000376561 MAP2K2P36507 400 aa18.83■□□□□ 0.6
CTTN-203ENST00000376561 BTBD6Q96KE9 485 aa18.83■□□□□ 0.6
CTTN-203ENST00000376561 RPS6KC1Q96S38 1066 aa18.83■□□□□ 0.6
CTTN-203ENST00000376561 PCDHGC3Q9UN70 934 aa18.83■□□□□ 0.6
CTTN-203ENST00000376561 PDCD11Q14690 1871 aaKnown RBP18.83■□□□□ 0.6
CTTN-203ENST00000376561 HTTP42858 3142 aa18.83■□□□□ 0.6
CTTN-203ENST00000376561 GRIN2DO15399 1336 aa18.83■□□□□ 0.6
CTTN-203ENST00000376561 CILPO75339 1184 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 LSM8O95777 96 aaKnown RBP18.82■□□□□ 0.6
CTTN-203ENST00000376561 RAD23BP54727 409 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 GLRA4Q5JXX5 417 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 USP38Q8NB14 1042 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 PCSK9Q8NBP7 692 aaKnown RBP18.82■□□□□ 0.6
CTTN-203ENST00000376561 WHAMMQ8TF30 809 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 TUBGCP4Q9UGJ1 667 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 DDX20Q9UHI6 824 aaKnown RBP18.82■□□□□ 0.6
CTTN-203ENST00000376561 DNAH12Q6ZR08 3092 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 CCDC151A5D8V7 595 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 MIF4GDA9UHW6 222 aaKnown RBP18.82■□□□□ 0.6
CTTN-203ENST00000376561 TUBBP07437 444 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 PAEPP09466 180 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 COMTP21964 271 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 TNNC1P63316 161 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 C1QBPQ07021 282 aaKnown RBP18.82■□□□□ 0.6
CTTN-203ENST00000376561 MYO1EQ12965 1108 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 PTP4A2Q12974 167 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 BRD3Q15059 726 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 RPAINQ86UA6 219 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 RASGEF1CQ8N431 466 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 BEST2Q8NFU1 509 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 RAET1EQ8TD07 263 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 RNF39Q9H2S5 420 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 IPPQ9Y573 584 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 SCN1AP35498 2009 aa18.82■□□□□ 0.6
CTTN-203ENST00000376561 TARSL2A2RTX5 802 aaKnown RBP18.81■□□□□ 0.6
CTTN-203ENST00000376561 CHRNA1P02708 482 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 CTSHP09668 335 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 VSNL1P62760 191 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 LIN9Q5TKA1 542 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 DCAF12L1Q5VU92 463 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 TWF2Q6IBS0 349 aaKnown RBP18.81■□□□□ 0.6
CTTN-203ENST00000376561 LLGL2Q6P1M3 1020 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 WDR93Q6P2C0 686 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 TMCO3Q6UWJ1 677 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 MMS22LQ6ZRQ5 1243 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 PHLDB2Q86SQ0 1253 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 UBE2Q2Q8WVN8 375 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 C18orf25Q96B23 403 aaPredicted RBP18.81■□□□□ 0.6
CTTN-203ENST00000376561 TWNKQ96RR1 684 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 SENP6Q9GZR1 1112 aaPredicted RBP18.81■□□□□ 0.6
CTTN-203ENST00000376561 CARD9Q9H257 536 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 ZNF446Q9NWS9 450 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 PARP2Q9UGN5 583 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 HMGXB4Q9UGU5 601 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 ANAPC7Q9UJX3 599 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 PGRMC1O00264 195 aaKnown RBP18.81■□□□□ 0.6
CTTN-203ENST00000376561 RPS6KA5O75582 802 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 RPLP2P05387 115 aaKnown RBP18.81■□□□□ 0.6
CTTN-203ENST00000376561 CD19P15391 556 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 MMP8P22894 467 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 CDH5P33151 784 aaPredicted RBP18.81■□□□□ 0.6
CTTN-203ENST00000376561 VEGFBP49765 207 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 XKR4Q5GH76 650 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 CCDC70Q6NSX1 233 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 SLC4A11Q8NBS3 891 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 TMEM35BQ8NCS4 154 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 SMG8Q8ND04 991 aaKnown RBP18.81■□□□□ 0.6
CTTN-203ENST00000376561 C1orf131Q8NDD1 294 aaKnown RBP18.81■□□□□ 0.6
CTTN-203ENST00000376561 PXYLP1Q8TE99 480 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 ALG3Q92685 438 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.81■□□□□ 0.62e-8■■□□□ 13.1
CTTN-203ENST00000376561 ZNF518BQ9C0D4 1074 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 RNF19AQ9NV58 838 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 KLK14Q9P0G3 267 aa18.81■□□□□ 0.6
CTTN-203ENST00000376561 UBQLN1Q9UMX0 589 aaKnown RBP18.81■□□□□ 0.6
CTTN-203ENST00000376561 SMIM28A0A1B0GU29 152 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 PPEF2O14830 753 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 INCA1Q0VD86 236 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 CC2D1AQ6P1N0 951 aaPredicted RBP18.8■□□□□ 0.6
CTTN-203ENST00000376561 CD101Q93033 1021 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 TMEM176AQ96HP8 235 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 LRRC1Q9BTT6 524 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 ELOVL4Q9GZR5 314 aa18.8■□□□□ 0.6
CTTN-203ENST00000376561 FAM124BQ9H5Z6 455 aaPredicted RBP18.8■□□□□ 0.6
CTTN-203ENST00000376561 TMEM59LQ9UK28 342 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms