RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 MTUS1Q9ULD2 1270 aa14.86□□□□□ -0.03
MSH5-202ENST00000375740 ATP6V1G2O95670 118 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 GJB1P08034 283 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 WDR49Q8IV35 697 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 CCT6BQ92526 530 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 C11orf70Q9BRQ4 267 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 RASAL2Q9UJF2 1139 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 ABLIM1O14639 778 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 OGTO15294 1046 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 THAP12O43422 761 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 GAS2O43903 313 aaKnown RBP14.85□□□□□ -0.03
MSH5-202ENST00000375740 COILP38432 576 aaPredicted RBP14.85□□□□□ -0.03
MSH5-202ENST00000375740 DRG2P55039 364 aaKnown RBP14.85□□□□□ -0.03
MSH5-202ENST00000375740 NOMO3P69849 1222 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 MYO1EQ12965 1108 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 MTMR3Q13615 1198 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 CYP1B1Q16678 543 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 C11orf91Q3C1V1 193 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 TRIM72Q6ZMU5 477 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 EXOC8Q8IYI6 725 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 NSMCE1Q8WV22 266 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 FMO2Q99518 471 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 MTMR12Q9C0I1 747 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 MROH8Q9H579 483 aa14.85□□□□□ -0.03
MSH5-202ENST00000375740 PEX19P40855 299 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 AP3M2P53677 418 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 PLTPP55058 493 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 MYL6P60660 151 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 ZNF844Q08AG5 666 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 GRIK3Q13003 919 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 USP50Q70EL3 339 aaPredicted RBP14.84□□□□□ -0.03
MSH5-202ENST00000375740 C1orf131Q8NDD1 294 aaKnown RBP14.84□□□□□ -0.03
MSH5-202ENST00000375740 MDM1Q8TC05 714 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 ZNF483Q8TF39 744 aaPredicted RBP14.84□□□□□ -0.03
MSH5-202ENST00000375740 SMARCAD1Q9H4L7 1026 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 KIF9Q9HAQ2 790 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 ADAM22Q9P0K1 906 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 CPSF3Q9UKF6 684 aaKnown RBP14.84□□□□□ -0.03
MSH5-202ENST00000375740 ATP8A1Q9Y2Q0 1164 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 FSCN2O14926 492 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 ASS1P00966 412 aaKnown RBP14.84□□□□□ -0.03
MSH5-202ENST00000375740 YBX3P16989 372 aaKnown RBP eCLIP14.84□□□□□ -0.03
MSH5-202ENST00000375740 EPHX2P34913 555 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 GJA5P36382 358 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 KCNJ1P48048 391 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 MCL1Q07820 350 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 GRM1Q13255 1194 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 PPP1R7Q15435 360 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 LIN9Q5TKA1 542 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 EFCAB12Q6NXP0 572 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 ZDHHC24Q6UX98 284 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 CCDC105Q8IYK2 499 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 CACNA2D3Q8IZS8 1091 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 ZNF606Q8WXB4 792 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 UPF1Q92900 1129 aaKnown RBP eCLIP14.84□□□□□ -0.03
MSH5-202ENST00000375740 NLRP4Q96MN2 994 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 TXLNGYQ9BZA5 131 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 IMPG2Q9BZV3 1241 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 C2orf40Q9H1Z8 148 aa14.84□□□□□ -0.03
MSH5-202ENST00000375740 NOVA2Q9UNW9 492 aaKnown RBP14.84□□□□□ -0.03
MSH5-202ENST00000375740 PODXLO00592 558 aa14.83□□□□□ -0.03
MSH5-202ENST00000375740 PPFIA2O75334 1257 aa14.83□□□□□ -0.03
MSH5-202ENST00000375740 MYZAPP0CAP1 466 aa14.83□□□□□ -0.03
MSH5-202ENST00000375740 POTEJP0CG39 1038 aa14.83□□□□□ -0.03
MSH5-202ENST00000375740 SLC1A1P43005 524 aa14.83□□□□□ -0.03
MSH5-202ENST00000375740 RPL21P46778 160 aaKnown RBP14.83□□□□□ -0.03
MSH5-202ENST00000375740 DUOXA2Q1HG44 320 aa14.83□□□□□ -0.03
MSH5-202ENST00000375740 ODF2Q5BJF6 829 aa14.83□□□□□ -0.03
MSH5-202ENST00000375740 DAB2IPQ5VWQ8 1189 aa14.83□□□□□ -0.03
MSH5-202ENST00000375740 CDR2LQ86X02 465 aaPredicted RBP14.83□□□□□ -0.03
MSH5-202ENST00000375740 CCDC50Q8IVM0 306 aa14.83□□□□□ -0.03
MSH5-202ENST00000375740 THNSL1Q8IYQ7 743 aa14.83□□□□□ -0.03
MSH5-202ENST00000375740 UBR7Q8N806 425 aa14.83□□□□□ -0.03
MSH5-202ENST00000375740 SPDL1Q96EA4 605 aa14.83□□□□□ -0.03
MSH5-202ENST00000375740 GRHL1Q9NZI5 618 aa14.83□□□□□ -0.03
MSH5-202ENST00000375740 GOLGA6L10A6NI86 522 aa14.83□□□□□ -0.04
MSH5-202ENST00000375740 B4GALT5O43286 388 aa14.83□□□□□ -0.04
MSH5-202ENST00000375740 CYP2C8P10632 490 aa14.83□□□□□ -0.04
MSH5-202ENST00000375740 SLC8A1P32418 973 aa14.83□□□□□ -0.04
MSH5-202ENST00000375740 OSTNP61366 133 aa14.83□□□□□ -0.04
MSH5-202ENST00000375740 MAMLD1Q13495 774 aa14.83□□□□□ -0.04
MSH5-202ENST00000375740 LACTB2Q53H82 288 aaPredicted RBP14.83□□□□□ -0.04
MSH5-202ENST00000375740 DPY19L2Q6NUT2 758 aa14.83□□□□□ -0.04
MSH5-202ENST00000375740 ARMC9Q7Z3E5 817 aa14.83□□□□□ -0.04
MSH5-202ENST00000375740 PHF13Q86YI8 300 aaPredicted RBP14.83□□□□□ -0.04
MSH5-202ENST00000375740 FBXO25Q8TCJ0 367 aa14.83□□□□□ -0.04
MSH5-202ENST00000375740 ZC3H15Q8WU90 426 aaKnown RBP14.83□□□□□ -0.04
MSH5-202ENST00000375740 RNPEPQ9H4A4 650 aa14.83□□□□□ -0.04
MSH5-202ENST00000375740 PTPN22Q9Y2R2 807 aa14.83□□□□□ -0.04
MSH5-202ENST00000375740 INO80B-WBP1J3KQ70 363 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 HBP1O60381 514 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 PROSCO94903 275 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 CD58P19256 250 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 GCKP35557 465 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 CLCN3P51790 818 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 ZNF132P52740 706 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 PTP4A2Q12974 167 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 TTLL4Q14679 1199 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 TSHZ1Q6ZSZ6 1077 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 C1orf54Q8WWF1 131 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms