RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 NRDE2Q9H7Z3 1164 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 CISHQ9NSE2 258 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 AIPL1Q9NZN9 384 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 CXXC1Q9P0U4 656 aaPredicted RBP13.15□□□□□ -0.3
SDHD-201ENST00000375549 HCSTQ9UBK5 93 aa13.15□□□□□ -0.3
SDHD-201ENST00000375549 PRG3Q9Y2Y8 225 aaPredicted RBP13.15□□□□□ -0.3
SDHD-201ENST00000375549 CYB561D2O14569 222 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 FERP16591 822 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 ACO1P21399 889 aaKnown RBP13.14□□□□□ -0.31
SDHD-201ENST00000375549 KLHL30Q0D2K2 578 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 WDR59Q6PJI9 974 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 TMEM270Q6UE05 265 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 FMNL3Q8IVF7 1028 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 C3orf58Q8NDZ4 430 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 HERVK_113Q902F9 699 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 YME1L1Q96TA2 773 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 CHP1Q99653 195 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 ZBED2Q9BTP6 218 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 SDCBP2Q9H190 292 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 KCNF1Q9H3M0 494 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 CYP3A43Q9HB55 503 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 GDAP2Q9NXN4 497 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 SLC4A7Q9Y6M7 1214 aa13.14□□□□□ -0.31
SDHD-201ENST00000375549 F8W810 466 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 NRP1O14786 923 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 CYP26A1O43174 497 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 HUS1O60921 280 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 KIF4AO95239 1232 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 ALDH2P05091 517 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 SERPING1P05155 500 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 CCDC172P0C7W6 258 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 HNRNPH3P31942 346 aaKnown RBP13.13□□□□□ -0.31
SDHD-201ENST00000375549 BRCC3P46736 316 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 SLC11A1P49279 550 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 CCZ1BP86790 482 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 CCZ1P86791 482 aaPredicted RBP13.13□□□□□ -0.31
SDHD-201ENST00000375549 BTG3Q14201 252 aaPredicted RBP13.13□□□□□ -0.31
SDHD-201ENST00000375549 MEA1Q16626 185 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 SOWAHAQ2M3V2 549 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 ZNF394Q53GI3 561 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
SDHD-201ENST00000375549 SPOUT1Q5T280 376 aaKnown RBP13.13□□□□□ -0.31
SDHD-201ENST00000375549 CYP26C1Q6V0L0 522 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 IRF2BP2Q7Z5L9 587 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 TMTC1Q8IUR5 882 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 FAM71AQ8IYT1 594 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 UBR7Q8N806 425 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 RBBP8NLQ8NC74 664 aaPredicted RBP13.13□□□□□ -0.31
SDHD-201ENST00000375549 CCDC112Q8NEF3 446 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 APPL2Q8NEU8 664 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 ZNF689Q96CS4 500 aaPredicted RBP13.13□□□□□ -0.31
SDHD-201ENST00000375549 SENP8Q96LD8 212 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 MTIF3Q9H2K0 278 aaKnown RBP13.13□□□□□ -0.31
SDHD-201ENST00000375549 FAN1Q9Y2M0 1017 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 LTBP2Q14767 1821 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 MICAL3Q7RTP6 2002 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 NT5C1B-RDH14C9J2C7 533 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 I3L4J1 428 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 TADA2AO75478 443 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 ITGB1P05556 798 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 PLEKP08567 350 aaPredicted RBP13.13□□□□□ -0.31
SDHD-201ENST00000375549 CLCN1P35523 988 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 MAGEA10P43363 369 aaPredicted RBP13.13□□□□□ -0.31
SDHD-201ENST00000375549 TIGD5Q53EQ6 642 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 CD300LGQ6UXG3 332 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 TMEM139Q8IV31 216 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 CMTR2Q8IYT2 770 aaKnown RBP13.13□□□□□ -0.31
SDHD-201ENST00000375549 OR6B3Q8NGW1 331 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 MRPL45Q9BRJ2 306 aaKnown RBP13.13□□□□□ -0.31
SDHD-201ENST00000375549 TMEM175Q9BSA9 504 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 COLEC11Q9BWP8 271 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 HAUS4Q9H6D7 363 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 CWH43Q9H720 699 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 L1RE1Q9UN81 338 aa13.13□□□□□ -0.31
SDHD-201ENST00000375549 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
SDHD-201ENST00000375549 PDCD11Q14690 1871 aaKnown RBP13.12□□□□□ -0.31
SDHD-201ENST00000375549 SOWAHDA6NJG2 315 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 TMEM189-UBE2V1I3L0A0 370 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 GJB5O95377 273 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 CALCAP01258 141 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 GALTP07902 379 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 ODC1P11926 461 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 ATP2A2P16615 1042 aaKnown RBP13.12□□□□□ -0.31
SDHD-201ENST00000375549 FECHP22830 423 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 PAX3P23760 479 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 EIF4A3P38919 411 aaKnown RBP13.12□□□□□ -0.31
SDHD-201ENST00000375549 PBX3P40426 434 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 NDST1P52848 882 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 BCAR1P56945 870 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 CDK17Q00537 523 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 PTK2Q05397 1052 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 ORC1Q13415 861 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 HGSNATQ68CP4 663 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 DPH6Q7L8W6 267 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 SLC47A2Q86VL8 602 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 ADGRF2Q8IZF7 708 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 PDCL2Q8N4E4 241 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 TTC39CQ8N584 583 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 TOP6BLQ8N6T0 577 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 CCDC42Q96M95 316 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms