RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 TNNC2P02585 160 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 UBA1P22314 1058 aaKnown RBP12.98□□□□□ -0.33
UBR4-203ENST00000375225 SLC26A2P50443 739 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 COPS2P61201 443 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 NOMO3P69849 1222 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 TRPC3Q13507 836 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 SIX1Q15475 284 aaPredicted RBP12.98□□□□□ -0.33
UBR4-203ENST00000375225 TARBP2Q15633 366 aaKnown RBP12.98□□□□□ -0.33
UBR4-203ENST00000375225 DUOXA2Q1HG44 320 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 SGSM1Q2NKQ1 1148 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 GKAP1Q5VSY0 366 aaPredicted RBP12.98□□□□□ -0.33
UBR4-203ENST00000375225 PLEKHA7Q6IQ23 1121 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 AADACL2Q6P093 401 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 TTC27Q6P3X3 843 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 PAXIP1Q6ZW49 1069 aaPredicted RBP12.98□□□□□ -0.33
UBR4-203ENST00000375225 RCOR2Q8IZ40 523 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 ANKS4BQ8N8V4 417 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 TMEM35BQ8NCS4 154 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 FEZF2Q8TBJ5 459 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 CPA5Q8WXQ8 436 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 CCDC114Q96M63 670 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 TCHPQ9BT92 498 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 TARS2Q9BW92 718 aaKnown RBP12.98□□□□□ -0.33
UBR4-203ENST00000375225 R3HDMLQ9H3Y0 253 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 ACTR5Q9H9F9 607 aaPredicted RBP12.98□□□□□ -0.33
UBR4-203ENST00000375225 ZFYVE28Q9HCC9 887 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 DDX56Q9NY93 547 aaKnown RBP12.98□□□□□ -0.33
UBR4-203ENST00000375225 STRIP2Q9ULQ0 834 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 MCM3APO60318 1980 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 ADGRA2Q96PE1 1338 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 GOLGA6L7A0A1B0GV03 622 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 SLC15A5A6NIM6 579 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 NOP56O00567 594 aaKnown RBP12.98□□□□□ -0.33
UBR4-203ENST00000375225 OGTO15294 1046 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 RIPK2O43353 540 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 MED7O43513 233 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 ACO1P21399 889 aaKnown RBP12.98□□□□□ -0.33
UBR4-203ENST00000375225 POLR2BP30876 1174 aaKnown RBP12.98□□□□□ -0.33
UBR4-203ENST00000375225 MCL1Q07820 350 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 FSTL1Q12841 308 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 GRB14Q14449 540 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 SLC29A2Q14542 456 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 PLCB4Q15147 1175 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 MAPK6Q16659 721 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 ZNF792Q3KQV3 632 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 LRRC38Q5VT99 294 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 MFSD5Q6N075 450 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 CRELD2Q6UXH1 353 aaPredicted RBP12.98□□□□□ -0.33
UBR4-203ENST00000375225 CCDC121Q6ZUS5 278 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 CPLX4Q7Z7G2 160 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 ZNF467Q7Z7K2 595 aaPredicted RBP12.98□□□□□ -0.33
UBR4-203ENST00000375225 DPP9Q86TI2 863 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 TAX1BP1Q86VP1 789 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 CACNA2D3Q8IZS8 1091 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 IPO4Q8TEX9 1081 aaKnown RBP12.98□□□□□ -0.33
UBR4-203ENST00000375225 CYFIP2Q96F07 1278 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 ANKRD36BP1Q96IX9 119 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 FGD4Q96M96 766 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 SERPINB12Q96P63 405 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 C11orf70Q9BRQ4 267 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 DCLK3Q9C098 648 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 ACP6Q9NPH0 428 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 CPA4Q9UI42 421 aa12.98□□□□□ -0.33
UBR4-203ENST00000375225 TLDC2A0PJX2 215 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 FAM155AB1AL88 458 aaPredicted RBP12.97□□□□□ -0.33
UBR4-203ENST00000375225 TLR3O15455 904 aaKnown RBP12.97□□□□□ -0.33
UBR4-203ENST00000375225 ASAP2O43150 1006 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 SORBS3O60504 671 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 CAND2O75155 1236 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 TJP3O95049 919 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 VNN1O95497 513 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 ATP4AP20648 1035 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 ADCY8P40145 1251 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 SSR1P43307 286 aaKnown RBP12.97□□□□□ -0.33
UBR4-203ENST00000375225 SP2Q02086 613 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 CAPSQ13938 189 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 PIGHQ14442 188 aaPredicted RBP12.97□□□□□ -0.33
UBR4-203ENST00000375225 TTLL4Q14679 1199 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 KYAT1Q16773 422 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 CDCA2Q69YH5 1023 aaPredicted RBP12.97□□□□□ -0.33
UBR4-203ENST00000375225 ARMCX2Q7L311 632 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 EEPD1Q7L9B9 569 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 PLPPR4Q7Z2D5 763 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 MICALL1Q8N3F8 863 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 CHMP6Q96FZ7 201 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 DDX27Q96GQ7 796 aaKnown RBP12.97□□□□□ -0.33
UBR4-203ENST00000375225 SELENOSQ9BQE4 189 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 FRMD8P1Q9BZ68 369 aaPredicted RBP12.97□□□□□ -0.33
UBR4-203ENST00000375225 NIF3L1Q9GZT8 377 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 VTA1Q9NP79 307 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 ANAPC5Q9UJX4 755 aa12.97□□□□□ -0.33
UBR4-203ENST00000375225 CNTNAP2Q9UHC6 1331 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 GSTTP1A0A1W2PQM5 241 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 C5orf60A6NFR6 353 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 H0YHG0 523 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 IL18RAPO95256 599 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 ASS1P00966 412 aaKnown RBP12.96□□□□□ -0.33
UBR4-203ENST00000375225 PRKCBP05771 671 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 TMEM191BP0C7N4 346 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 TCF7P36402 384 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms