RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 IVNS1ABPQ9Y6Y0 642 aa25.28■■□□□ 1.64
CDK9-201ENST00000373264 ABLIM1O14639 778 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 ETS1P14921 441 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 MMP8P22894 467 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 RAP1GAPP47736 663 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 LRRC14Q15048 493 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 Q3C1V9 767 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 C6orf118Q5T5N4 469 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 EXOC3L1Q86VI1 746 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 RUNDC3BQ96NL0 473 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 MLXIPLQ9NP71 852 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 CISHQ9NSE2 258 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 CNMDO75829 334 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 ATF2P15336 505 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 TBXAS1P24557 533 aaPredicted RBP25.27■■□□□ 1.64
CDK9-201ENST00000373264 METTL7BQ6UX53 244 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 CPLX4Q7Z7G2 160 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 FBXO16Q8IX29 292 aaPredicted RBP25.27■■□□□ 1.64
CDK9-201ENST00000373264 ATL2Q8NHH9 583 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.27■■□□□ 1.64
CDK9-201ENST00000373264 MGARPQ8TDB4 240 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 NLRP4Q96MN2 994 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 SCLT1Q96NL6 688 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 FHDC1Q9C0D6 1143 aaPredicted RBP25.27■■□□□ 1.64
CDK9-201ENST00000373264 ANAPC5Q9UJX4 755 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 POLIQ9UNA4 740 aa25.27■■□□□ 1.64
CDK9-201ENST00000373264 TOM1L1O75674 476 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 PRKCBP05771 671 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 CETPP11597 493 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 ATF7P17544 494 aaPredicted RBP25.26■■□□□ 1.63
CDK9-201ENST00000373264 EEF1DP3Q658K8 133 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 MFSD7Q6UXD7 560 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 PSTPIP1O43586 416 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 ATP2C2O75185 946 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 ITIH2P19823 946 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 NEDD9Q14511 834 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 HP1BP3Q5SSJ5 553 aaPredicted RBP25.26■■□□□ 1.63
CDK9-201ENST00000373264 FAM160B1Q5W0V3 765 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 GPAT2Q6NUI2 795 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 KATNAL2Q8IYT4 538 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 C9orf72Q96LT7 481 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 ZNF317Q96PQ6 595 aaPredicted RBP25.26■■□□□ 1.63
CDK9-201ENST00000373264 GPR20Q99678 358 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 SGIP1Q9BQI5 828 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 MRPL4Q9BYD3 311 aaKnown RBP25.26■■□□□ 1.63
CDK9-201ENST00000373264 OSBPL7Q9BZF2 842 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 MINDY3Q9H8M7 445 aa25.26■■□□□ 1.63
CDK9-201ENST00000373264 CNOT10Q9H9A5 744 aaKnown RBP25.26■■□□□ 1.63
CDK9-201ENST00000373264 MRPL47Q9HD33 250 aaKnown RBP25.26■■□□□ 1.63
CDK9-201ENST00000373264 SRRM3A6NNA2 597 aaPredicted RBP25.25■■□□□ 1.63
CDK9-201ENST00000373264 AGTP01019 485 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 ABCD1P33897 745 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 C1QBPQ07021 282 aaKnown RBP25.25■■□□□ 1.63
CDK9-201ENST00000373264 ADCY1Q08828 1119 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 TNFAIP8L3Q5GJ75 292 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 TRIM72Q6ZMU5 477 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 IPO4Q8TEX9 1081 aaKnown RBP25.25■■□□□ 1.63
CDK9-201ENST00000373264 IMPG2Q9BZV3 1241 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 PARVAQ9NVD7 372 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 KCNG1Q9UIX4 513 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 DNPEPQ9ULA0 475 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 TMEM191CA6NGB0 347 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 GAS8O95995 478 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 TMEM191BP0C7N4 346 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 CYP4X1Q8N118 509 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 CHMP6Q96FZ7 201 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 ASCC2Q9H1I8 757 aaPredicted RBP25.25■■□□□ 1.63
CDK9-201ENST00000373264 NXF1Q9UBU9 619 aaKnown RBP25.25■■□□□ 1.63
CDK9-201ENST00000373264 TBK1Q9UHD2 729 aa25.25■■□□□ 1.63
CDK9-201ENST00000373264 HOXC6P09630 235 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 IQCF3P0C7M6 154 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 CLCN3P51790 818 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 NFX1Q12986 1120 aaKnown RBP25.24■■□□□ 1.63
CDK9-201ENST00000373264 FAM182AQ5T1J6 154 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 ZPBP2Q6X784 338 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 WDR49Q8IV35 697 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 LRRC34Q8IZ02 419 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 KCNN1Q92952 543 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 PDGFCQ9NRA1 345 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 NINJ2Q9NZG7 142 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 C5orf60A6NFR6 353 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 CPP00450 1065 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 IRX3P78415 501 aaPredicted RBP25.24■■□□□ 1.63
CDK9-201ENST00000373264 GJC2Q5T442 439 aaPredicted RBP25.24■■□□□ 1.63
CDK9-201ENST00000373264 TRMT10CQ7L0Y3 403 aaKnown RBP25.24■■□□□ 1.63
CDK9-201ENST00000373264 GPC2Q8N158 579 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 CABS1Q96KC9 395 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 TMEM109Q9BVC6 243 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 C10orf88Q9H8K7 445 aa25.24■■□□□ 1.63
CDK9-201ENST00000373264 INTS9Q9NV88 658 aaKnown RBP25.24■■□□□ 1.63
CDK9-201ENST00000373264 CPSF3Q9UKF6 684 aaKnown RBP25.24■■□□□ 1.63
CDK9-201ENST00000373264 CDH8P55286 799 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 WDR78Q5VTH9 848 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 IZUMO3Q5VZ72 239 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 GSTA5Q7RTV2 222 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 VCPIP1Q96JH7 1222 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 SAE1Q9UBE0 346 aaPredicted RBP25.23■■□□□ 1.63
CDK9-201ENST00000373264 SCINQ9Y6U3 715 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 OTOFQ9HC10 1997 aa25.23■■□□□ 1.63
CDK9-201ENST00000373264 EVPLQ92817 2033 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms